myRT

myRT report for GCA_003692595.1_ASM369259v1

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Seq: CP024058.1 Lactobacillus plantarum strain KACC 92189 chromosome, complete genome (3241428 bp)
Overview 1 RT 1: 580692-586311 bp 2 RT 2: 1496941-1502824 bp Neighborhood of RT #1 [580692, 586311] PRK06481 fumC RVT-GII GIIM Neighborhood of RT #2 [1496941, 1502844] PHA02517 RVT-UG12 PRK00103 DegQ Feature: gene Location: 580692-582080 bp Feature: domain Description: PRK06481 Location: 580731-582072 bp Feature: domain Description: PRK06481 Location: 580731 -582072 bp Feature: gene Location: 582253-583635 bp Feature: domain Description: fumC Location: 582256-583624 bp Feature: domain Description: fumC Location: 582256-583624 bp Feature: gene Location: 584194-585282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584302-584920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584302-584920 bp Feature: domain Description: GIIM Note: maturase Location: 584974-585193 bp Feature: domain Description: GIIM Note: maturase Location: 584974-5851 93 bp Feature: gene Location: 585344-585496 bp Feature: gene Location: 586075-586311 bp Feature: gene Location: 1496941-1497837 bp Feature: domain Description: PHA02517 Location: 1497037-1497808 bp Feature: domain Description: PHA0251 7 Location: 1 497037-1 497808 bp Feature: gene Location: 1498659-1499144 bp Feature: gene Location: 1499149-1500474 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 1499668-1500115 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 1 499668-1 5001 1 5 bp Feature: gene Location: 1500548-1501027 bp Feature: domain Description: PRK00103 Location: 1500551-1501025 bp Feature: domain Description: PRK001 03 Location: 1 500551 -1 501 025 bp Feature: gene Location: 1501582-1502844 bp Feature: domain Description: DegQ Location: 1501702-1502824 bp Feature: domain Description: DegQ Location: 1 501 702-1 502824 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06481 (flavocytochrome c), fumC (PRK00485), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), RVT-UG12, PRK00103 (rRNA large subunit methyltransferase; Provisional), DegQ (pfam08181)