myRT

myRT report for GCA_003703795.1_ASM370379v1

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Seq: CP033251.1 Escherichia coli strain ECCHD184 plasmid pTB211, complete sequence (164062 bp)
Overview 1 RT 1: 20728-29153 bp 2 RT 2: 138349-143145 bp Neighborhood of RT #1 [20728, 29420] IS285 PHA02517 RVT-GII GIIM InsG YkfC PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [138349, 143162] RAYT RVT-GII GIIM PRK11114 Feature: gene Location: 20728-21744 bp Feature: domain Description: IS285 Location: 20734-21733 bp Feature: domain Description: IS285 Location: 20734-21 733 bp Feature: gene Location: 21765-22230 bp Feature: domain Description: PHA02517 Location: 21768-21963 bp Feature: domain Description: PHA0251 7 Location: 21 768-21 963 bp Feature: gene Location: 22311-23693 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22443-23175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22443-231 75 bp Feature: domain Description: GIIM Note: maturase Location: 23253-23448 bp Feature: domain Description: GIIM Note: maturase Location: 23253-23448 bp Feature: gene Location: 23750-24862 bp Ori: AYP04527.1 Feature: domain Description: InsG Location: 23753-24791 bp Feature: domain Description: InsG Location: 23753-24791 bp Feature: gene Location: 25029-25184 bp Ori: AYP04528.1 Feature: domain Description: YkfC Location: 25038-25179 bp Feature: domain Description: YkfC Location: 25038-251 79 bp Feature: gene Location: 26169-26759 bp Ori: AYP04529.1 Feature: domain Description: PHA02517 Location: 26355-26694 bp Feature: domain Description: PHA0251 7 Location: 26355-26694 bp Feature: gene Location: 26647-27057 bp Feature: gene Location: 27351-28874 bp Ori: AYP04531.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27624-28356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27624-28356 bp Feature: domain Description: GIIM Note: maturase Location: 28431-28629 bp Feature: domain Description: GIIM Note: maturase Location: 28431 -28629 bp Feature: gene Location: 28955-29420 bp Feature: domain Description: PHA02517 Location: 28958-29153 bp Feature: domain Description: PHA0251 7 Location: 28958-291 53 bp Feature: gene Location: 138349-138735 bp Gene: tnpA Feature: domain Description: RAYT Location: 138394-138736 bp Feature: domain Description: RAYT Location: 1 38394-1 38736 bp Feature: gene Location: 138704-138820 bp Feature: gene Location: 138922-140268 bp Ori: AYP04620.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 139210-139828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3921 0-1 39828 bp Feature: domain Description: GIIM Note: maturase Location: 139876-140107 bp Feature: domain Description: GIIM Note: maturase Location: 1 39876-1 401 07 bp Feature: gene Location: 140493-140672 bp Feature: gene Location: 141012-143162 bp Ori: AYP04621.1 Gene: bcsB Feature: domain Description: PRK11114 Location: 141072-143145 bp Feature: domain Description: PRK1 1 1 1 4 Location: 1 41 072-1 431 45 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS285 (COG3328), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsG (COG3385), YkfC (COG3344), RAYT (COG1943), PRK11114 (cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB)