myRT

myRT report for GCA_003711125.1_ASM371112v1

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Seq: CP024590.1 Enterococcus avium strain FDAARGOS_184 chromosome, complete genome (3723378 bp)
Overview 1 RT 1: 225013-234905 bp 2 RT 2: 768234-776960 bp 3 RT 3: 1142798-1148583 bp 4 RT 4: 1238946-1241956 bp 5 RT 5: 3616979-3623812 bp 6 RT 6: 3647165-3653288 bp 7 RT 7: 3658507-3666070 bp Neighborhood of RT #1 [225013, 234934] peptidase-T LPG_synthase_TM RVT-GII RVT-GII GIIM RVT-GII GIIM AL_MDR chaperone_ClpB Neighborhood of RT #2 [768234, 776986] HTH_Tnp_1 RVT-GII FtsK DUF961 RVT-GII GIIM RAYT CypX Neighborhood of RT #3 [1142798, 1148799] agaS_fam MngR RVT-GII group_II_RT_mat Y1_Tnp Neighborhood of RT #4 [1238946, 1241956] RVT-GII Neighborhood of RT #5 [3616979, 3623841] ABC2_membrane HTH_BmrR BltR2 RVT-GII RVT-GII GIIM RVT-GII GIIM AraC Cass2 Neighborhood of RT #6 [3647165, 3653416] RelB_DinJ FtsK_SpoIIIE RVT-GII RVT-GII GIIM RVT-GII HNHc FtsK Neighborhood of RT #7 [3658507, 3666070] TcpE RVT-GII HNHc AAA_10 Feature: gene Location: 225013-226242 bp Ori: AYQ23320.1 Gene: pepT Feature: domain Description: peptidase-T Location: 225019-226237 bp Feature: domain Description: peptidase-T Location: 22501 9-226237 bp Feature: gene Location: 226345-227379 bp Ori: AYQ23321.1 Feature: domain Description: LPG_synthase_TM Location: 226384-227302 bp Feature: domain Description: LPG_synthase_TM Location: 226384-227302 bp Feature: gene Location: 227835-228629 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 228156-228630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2281 56-228630 bp Feature: gene Location: 229170-230414 bp Ori: AYQ23322.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 229374-230031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 229374-230031 bp Feature: domain Description: GIIM Note: maturase Location: 230112-230328 bp Feature: domain Description: GIIM Note: maturase Location: 2301 1 2-230328 bp Feature: gene Location: 230491-231087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 230494-230635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 230494-230635 bp Feature: domain Description: GIIM Note: maturase Location: 230692-230908 bp Feature: domain Description: GIIM Note: maturase Location: 230692-230908 bp Feature: gene Location: 231163-232173 bp Ori: AYQ23323.1 Feature: domain Description: AL_MDR Location: 231175-232165 bp Feature: domain Description: AL_MDR Location: 231 1 75-2321 65 bp Feature: gene Location: 232331-234934 bp Ori: AYQ23324.1 Gene: clpB Feature: domain Description: chaperone_ClpB Location: 232349-234905 bp Feature: domain Description: chaperone_ClpB Location: 232349-234905 bp Feature: gene Location: 768234-768462 bp Feature: domain Description: HTH_Tnp_1 Location: 768240-768444 bp Feature: domain Description: HTH_Tnp_1 Location: 768240-768444 bp Feature: gene Location: 767336-768234 bp Feature: gene Location: 768532-769740 bp Ori: AYQ23816.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 768796-769618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 768796-76961 8 bp Feature: gene Location: 770316-771533 bp Ori: AYQ23817.1 Feature: domain Description: FtsK Location: 770961-771459 bp Feature: domain Description: FtsK Location: 770961 -771 459 bp Feature: gene Location: 771583-771993 bp Ori: AYQ23818.1 Feature: domain Description: DUF961 Location: 771640-771919 bp Feature: domain Description: DUF961 Location: 771 640-771 91 9 bp Feature: gene Location: 771996-772346 bp Feature: gene Location: 772462-773850 bp Ori: AYQ23820.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 772783-773398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 772783-773398 bp Feature: domain Description: GIIM Note: maturase Location: 773455-773671 bp Feature: domain Description: GIIM Note: maturase Location: 773455-773671 bp Feature: gene Location: 774423-774896 bp Ori: AYQ26461.1 Feature: domain Description: RAYT Location: 774441-774822 bp Feature: domain Description: RAYT Location: 774441 -774822 bp Feature: gene Location: 775727-776986 bp Ori: AYQ23821.1 Feature: domain Description: CypX Location: 775778-776960 bp Feature: domain Description: CypX Location: 775778-776960 bp Feature: gene Location: 1142798-1143970 bp Ori: AYQ24124.1 Gene: agaS Feature: domain Description: agaS_fam Location: 1142846-1143965 bp Feature: domain Description: agaS_fam Location: 1 1 42846-1 1 43965 bp Feature: gene Location: 1143982-1144704 bp Ori: AYQ24125.1 Feature: domain Description: MngR Location: 1143997-1144687 bp Feature: domain Description: MngR Location: 1 1 43997-1 1 44687 bp Feature: gene Location: 1146083-1147239 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1146290-1146437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 46290-1 1 46437 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1147001-1147160 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 1 47001 -1 1 471 60 bp Feature: gene Location: 1147736-1148220 bp Feature: gene Location: 1148364-1148799 bp Feature: domain Description: Y1_Tnp Location: 1148403-1148583 bp Feature: domain Description: Y1 _Tnp Location: 1 1 48403-1 1 48583 bp Feature: gene Location: 1238946-1239173 bp Feature: gene Location: 1239233-1239724 bp Feature: gene Location: 1240237-1240623 bp Ori: AYQ24188.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1240441-1240621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 240441 -1 240621 bp Feature: gene Location: 1241248-1241496 bp Feature: gene Location: 1241519-1241956 bp Feature: gene Location: 3616979-3617719 bp Ori: AYQ26332.1 Feature: domain Description: ABC2_membrane Location: 3617042-3617609 bp Feature: domain Description: ABC2_membrane Location: 361 7042-361 7609 bp Feature: gene Location: 3617742-3618584 bp Ori: AYQ26333.1 Feature: domain Description: HTH_BmrR Location: 3617781-3618090 bp Feature: domain Description: HTH_BmrR Location: 361 7781 -361 8090 bp Feature: domain Description: BltR2 Location: 3618108-3618561 bp Feature: domain Description: BltR2 Location: 361 81 08-361 8561 bp Feature: gene Location: 3619083-3619877 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3619404-3619878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 361 9404-361 9878 bp Feature: gene Location: 3620418-3621662 bp Ori: AYQ26334.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3620622-3621279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3620622-3621 279 bp Feature: domain Description: GIIM Note: maturase Location: 3621360-3621576 bp Feature: domain Description: GIIM Note: maturase Location: 3621 360-3621 576 bp Feature: gene Location: 3621739-3622335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3621742-3621883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3621 742-3621 883 bp Feature: domain Description: GIIM Note: maturase Location: 3621940-3622156 bp Feature: domain Description: GIIM Note: maturase Location: 3621 940-36221 56 bp Feature: gene Location: 3622640-3622825 bp Feature: gene Location: 3622933-3623841 bp Ori: AYQ26336.1 Feature: domain Description: AraC Location: 3622954-3623248 bp Feature: domain Description: AraC Location: 3622954-3623248 bp Feature: domain Description: Cass2 Location: 3623440-3623812 bp Feature: domain Description: Cass2 Location: 3623440-362381 2 bp Feature: gene Location: 3647165-3647518 bp Ori: AYQ26363.1 Feature: domain Description: RelB_DinJ Location: 3647384-3647510 bp Feature: domain Description: RelB_DinJ Location: 3647384-364751 0 bp Feature: gene Location: 3647587-3648603 bp Ori: AYQ26364.1 Feature: domain Description: FtsK_SpoIIIE Location: 3648244-3648484 bp Feature: domain Description: FtsK_SpoIIIE Location: 3648244-3648484 bp Feature: gene Location: 3649197-3650108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3649563-3650109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3649563-36501 09 bp Feature: gene Location: 3650652-3651896 bp Ori: AYQ26365.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3650856-3651513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3650856-3651 51 3 bp Feature: domain Description: GIIM Note: maturase Location: 3651594-3651810 bp Feature: domain Description: GIIM Note: maturase Location: 3651 594-3651 81 0 bp Feature: gene Location: 3651973-3652323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3651976-3652123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3651 976-36521 23 bp Feature: gene Location: 3652443-3652934 bp Ori: AYQ26366.1 Feature: domain Description: HNHc Note: nucleases Location: 3652656-3652821 bp Feature: domain Description: HNHc Note: nucleases Location: 3652656-3652821 bp Feature: gene Location: 3653060-3653416 bp Ori: AYQ26556.1 Feature: domain Description: FtsK Location: 3653072-3653288 bp Feature: domain Description: FtsK Location: 3653072-3653288 bp Feature: gene Location: 3658507-3658896 bp Ori: AYQ26375.1 Feature: domain Description: TcpE Location: 3658525-3658825 bp Feature: domain Description: TcpE Location: 3658525-3658825 bp Feature: gene Location: 3658883-3660142 bp Feature: gene Location: 3660820-3662622 bp Ori: AYQ26377.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3661117-3661816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3661 1 1 7-3661 81 6 bp Feature: domain Description: HNHc Note: nucleases Location: 3662371-3662509 bp Feature: domain Description: HNHc Note: nucleases Location: 3662371 -3662509 bp Feature: gene Location: 3662662-3663942 bp Ori: AYQ26378.1 Feature: domain Description: AAA_10 Location: 3662824-3663907 bp Feature: domain Description: AAA_1 0 Location: 3662824-3663907 bp Feature: gene Location: 3663947-3666070 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT peptidase-T (TIGR01882), LPG_synthase_TM (pfam03706), RVT-GII, GIIM (pfam08388), AL_MDR (cd08252), chaperone_ClpB (TIGR03346), HTH_Tnp_1 (pfam01527), FtsK (COG1674), DUF961 (pfam06125), RAYT (COG1943)
CypX (COG2124), agaS_fam (TIGR02815), MngR (COG2188), group_II_RT_mat (TIGR04416), Y1_Tnp (pfam01797), ABC2_membrane (pfam01061), HTH_BmrR (cd01107), BltR2 (COG4978), AraC (COG2207), Cass2 (pfam14526)
RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), HNHc (smart00507), TcpE (pfam12648), AAA_10 (pfam12846)