myRT

myRT report for GCA_003711245.1_ASM371124v1

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Seq: CP017686.1 Candidatus Methanomethylophilus alvus strain Mx-05 chromosome, complete genome (1666767 bp)
Overview 1 RT 1: 635512-640951 bp 2 RT 2: 730858-737939 bp 3 RT 3: 1262322-1267155 bp Neighborhood of RT #1 [635512, 641412] RIBOc EXOIII RVT-GII GIIM COG1373 DUF1624 Neighborhood of RT #2 [730858, 738220] COG1602 Big_2 RVT-UG26 AAA-ATPase_like PDDEXK_9 COG1579 Neighborhood of RT #3 [1262322, 1267155] Nei zf-ribbon_3 zf-ribbon_3 zf-ribbon_3 RVT-GII Feature: gene Location: 635512-635802 bp Feature: gene Location: 636239-637231 bp Ori: AYQ54831.1 Feature: domain Description: RIBOc Location: 636293-636677 bp Feature: domain Description: RIBOc Location: 636293-636677 bp Feature: domain Description: EXOIII Location: 636728-637214 bp Feature: domain Description: EXOIII Location: 636728-63721 4 bp Feature: gene Location: 637518-638171 bp Ori: AYQ54832.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 637530-637641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 637530-637641 bp Feature: domain Description: GIIM Note: maturase Location: 637707-637941 bp Feature: domain Description: GIIM Note: maturase Location: 637707-637941 bp Feature: gene Location: 638573-640030 bp Ori: AYQ54833.1 Feature: domain Description: COG1373 Location: 638585-639797 bp Feature: domain Description: COG1 373 Location: 638585-639797 bp Feature: gene Location: 640312-641412 bp Ori: AYQ54834.1 Feature: domain Description: DUF1624 Location: 640339-640951 bp Feature: domain Description: DUF1 624 Location: 640339-640951 bp Feature: gene Location: 730858-732180 bp Ori: AYQ54906.1 Feature: domain Description: COG1602 Location: 730888-732142 bp Feature: domain Description: COG1 602 Location: 730888-7321 42 bp Feature: gene Location: 732411-733982 bp Ori: AYQ54907.1 Feature: domain Description: Big_2 Location: 732582-732798 bp Feature: domain Description: Big_2 Location: 732582-732798 bp Feature: gene Location: 734134-735375 bp Ori: AYQ54908.1 Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 734335-734947 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 734335-734947 bp Feature: gene Location: 736217-737371 bp Ori: AYQ54909.1 Feature: domain Description: AAA-ATPase_like Location: 736226-736625 bp Feature: domain Description: AAA-ATPase_like Location: 736226-736625 bp Feature: domain Description: PDDEXK_9 Location: 737063-737354 bp Feature: domain Description: PDDEXK_9 Location: 737063-737354 bp Feature: gene Location: 737387-738220 bp Ori: AYQ54910.1 Feature: domain Description: COG1579 Location: 737555-737939 bp Feature: domain Description: COG1 579 Location: 737555-737939 bp Feature: gene Location: 1262322-1263146 bp Ori: AYQ55378.1 Feature: domain Description: Nei Location: 1262325-1263141 bp Feature: domain Description: Nei Location: 1 262325-1 2631 41 bp Feature: gene Location: 1263223-1264368 bp Ori: AYQ55379.1 Feature: domain Description: zf-ribbon_3 Location: 1264057-1264117 bp Feature: domain Description: zf-ribbon_3 Location: 1 264057-1 2641 1 7 bp Feature: domain Description: zf-ribbon_3 Location: 1264168-1264231 bp Feature: domain Description: zf-ribbon_3 Location: 1 2641 68-1 264231 bp Feature: domain Description: zf-ribbon_3 Location: 1264297-1264366 bp Feature: domain Description: zf-ribbon_3 Location: 1 264297-1 264366 bp Feature: gene Location: 1264763-1265365 bp Ori: AYQ55380.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1264772-1265210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 264772-1 26521 0 bp Feature: gene Location: 1265558-1266160 bp Feature: gene Location: 1266625-1267155 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RIBOc (smart00535), EXOIII (smart00479), RVT-GII, GIIM (pfam08388), COG1373 (Predicted ATPase, AAA+ superfamily ), DUF1624 (pfam07786), COG1602 (Uncharacterized protein ), Big_2 (pfam02368), RVT-UG26, AAA-ATPase_like (pfam09820)
PDDEXK_9 (pfam08011), COG1579 (Predicted nucleic acid-binding protein, contains Zn-ribbon domain ), Nei (COG0266), zf-ribbon_3 (pfam13248)