myRT

myRT report for GCA_003711265.1_ASM371126v1

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Seq: CP024634.1 Bathymodiolus thermophilus thioautotrophic gill symbiont strain EPR9N chromosome, complete genome (2832685 bp)
Overview 1 RT 1: 724623-737236 bp 2 RT 2: 834359-839148 bp 3 RT 3: 910417-915877 bp Neighborhood of RT #1 [724623, 738243] PRK10416 RVT-UG17 CA Cadherin_repeat Cadherin_repeat Cadherin_repeat Neighborhood of RT #2 [834359, 839156] PRK00218 mnmA RVT-Retrons RVT-Retrons PhoH COG2847 Neighborhood of RT #3 [910417, 915885] MoxR NorD RVT-AbiP2 VagC Feature: gene Location: 724623-729770 bp Feature: gene Location: 729865-730809 bp Ori: AYQ56251.1 Feature: domain Description: PRK10416 Location: 729886-730807 bp Feature: domain Description: PRK1 041 6 Location: 729886-730807 bp Feature: gene Location: 731499-732710 bp Ori: AYQ56252.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 731712-732312 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 731 71 2-73231 2 bp Feature: gene Location: 733466-735187 bp Ori: AYQ56253.1 Feature: domain Description: CA Location: 733940-734204 bp Feature: domain Description: CA Location: 733940-734204 bp Feature: gene Location: 736006-738243 bp Ori: AYQ56254.1 Feature: domain Description: Cadherin_repeat Location: 736429-736675 bp Feature: domain Description: Cadherin_repeat Location: 736429-736675 bp Feature: domain Description: Cadherin_repeat Location: 736714-736960 bp Feature: domain Description: Cadherin_repeat Location: 73671 4-736960 bp Feature: domain Description: Cadherin_repeat Location: 736993-737236 bp Feature: domain Description: Cadherin_repeat Location: 736993-737236 bp Feature: gene Location: 834359-834964 bp Ori: AYQ56324.1 Feature: domain Description: PRK00218 Location: 834362-834953 bp Feature: domain Description: PRK0021 8 Location: 834362-834953 bp Feature: gene Location: 834979-836046 bp Ori: AYQ56325.1 Feature: domain Description: mnmA Location: 834982-836035 bp Feature: domain Description: mnmA Location: 834982-836035 bp Feature: gene Location: 836147-836701 bp Ori: AYQ56326.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 836246-836534 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 836246-836534 bp Feature: gene Location: 836698-837165 bp Ori: AYQ56327.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 836809-837058 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 836809-837058 bp Feature: gene Location: 837479-838396 bp Ori: AYQ56328.1 Feature: domain Description: PhoH Location: 837488-838388 bp Feature: domain Description: PhoH Location: 837488-838388 bp Feature: gene Location: 838650-839156 bp Ori: AYQ56329.1 Feature: domain Description: COG2847 Location: 838722-839148 bp Feature: domain Description: COG2847 Location: 838722-8391 48 bp Feature: gene Location: 910417-911232 bp Ori: AYQ56393.1 Feature: domain Description: MoxR Location: 910468-911098 bp Feature: domain Description: MoxR Location: 91 0468-91 1 098 bp Feature: gene Location: 911270-913627 bp Ori: AYQ56394.1 Feature: domain Description: NorD Location: 912710-913619 bp Feature: domain Description: NorD Location: 91 271 0-91 361 9 bp Feature: gene Location: 913631-915220 bp Ori: AYQ56395.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 914039-914486 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 91 4039-91 4486 bp Feature: gene Location: 915248-915385 bp Feature: gene Location: 915655-915885 bp Ori: AYQ56397.1 Feature: domain Description: VagC Location: 915658-915877 bp Feature: domain Description: VagC Location: 91 5658-91 5877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10416 (signal recognition particle-docking protein FtsY; Provisional), RVT-UG17, CA (smart00112), Cadherin_repeat (cd11304), PRK00218 (lysogenization regulator HflD), mnmA (PRK14665), RVT-Retrons, PhoH (pfam02562), COG2847 (Copper(I)-binding protein ), MoxR (COG0714)
NorD (COG4548), RVT-AbiP2, VagC (COG4456)