myRT

myRT report for GCA_003718415.1_ASM371841v1

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Seq: CP029963.1 Salmonella enterica subsp. enterica serovar Typhi strain 343078_228140 plasmid pK91, complete sequence (93445 bp)
Overview 1 RT 1: 15877-25820 bp Neighborhood of RT #1 [15877, 25822] DDE_Tnp_Tn3 DDE_Tnp_Tn3 RVT-GII GIIM COG3547 Lon_rel_chp Feature: gene Location: 15877-17697 bp Ori: AYU40559.1 Feature: domain Description: DDE_Tnp_Tn3 Location: 16471-17629 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 1 6471 -1 7629 bp Feature: gene Location: 18349-19251 bp Ori: AYU40560.1 Feature: domain Description: DDE_Tnp_Tn3 Location: 18433-19183 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 1 8433-1 91 83 bp Feature: gene Location: 20188-21711 bp Ori: AYU40561.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20461-21193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20461 -21 1 93 bp Feature: domain Description: GIIM Note: maturase Location: 21268-21466 bp Feature: domain Description: GIIM Note: maturase Location: 21 268-21 466 bp Feature: gene Location: 22253-23329 bp Ori: AYU40562.1 Feature: domain Description: COG3547 Location: 22292-23213 bp Feature: domain Description: COG3547 Location: 22292-2321 3 bp Feature: gene Location: 23732-25822 bp Ori: AYU40563.1 Feature: domain Description: Lon_rel_chp Location: 23804-25820 bp Feature: domain Description: Lon_rel_chp Location: 23804-25820 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_Tn3 (pfam01526), RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), Lon_rel_chp (TIGR02653)