myRT

myRT report for GCA_003790525.1_ASM379052v1

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Seq: CP033633.1 Escherichia coli isolate ECCNB12-2 plasmid pTB-nb2, complete sequence (139752 bp)
Overview 1 RT 1: 121376-125016 bp Neighborhood of RT #1 [121376, 125016] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 121376-122094 bp Feature: domain Description: InsE Location: 121379-121715 bp Feature: domain Description: InsE Location: 1 21 379-1 21 71 5 bp Feature: domain Description: PHA02517 Location: 121742-121997 bp Feature: domain Description: PHA0251 7 Location: 1 21 742-1 21 997 bp Feature: gene Location: 122087-122458 bp Feature: gene Location: 122767-124275 bp Ori: AYW28350.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123025-123757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 23025-1 23757 bp Feature: domain Description: GIIM Note: maturase Location: 123832-124030 bp Feature: domain Description: GIIM Note: maturase Location: 1 23832-1 24030 bp Feature: gene Location: 124365-124838 bp Feature: domain Description: PHA02517 Location: 124371-124836 bp Feature: domain Description: PHA0251 7 Location: 1 24371 -1 24836 bp Feature: gene Location: 124804-125016 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: CP033635.1 Escherichia coli isolate ECCNB12-2 chromosome, complete genome (5539489 bp)
Overview 1 RT 1: 360771-366463 bp 2 RT 2: 2606708-2610570 bp 3 RT 3: 2949267-2953267 bp Neighborhood of RT #1 [360771, 366921] InsE RVT-GII GIIM PHA02517 HsdM Neighborhood of RT #2 [2606708, 2610578] InsE RVT-GII GIIM PHA02517 PHA02517 Neighborhood of RT #3 [2949267, 2953275] DcuC RVT-GII RVT-GII Asparaginase_2 Feature: gene Location: 360771-361510 bp Feature: domain Description: InsE Location: 360774-361110 bp Feature: domain Description: InsE Location: 360774-361110 bp Feature: gene Location: 361503-361874 bp Feature: gene Location: 362168-363691 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362441-363173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362 441-363173 bp Feature: domain Description: GIIM Note: maturase Location: 363248-363446 bp Feature: domain Description: GIIM Note: maturase Location: 3632 48-363446 bp Feature: gene Location: 363772-364239 bp Feature: domain Description: PHA02517 Location: 363775-364234 bp Feature: domain Description: PHA02 517 Location: 363775-3642 34 bp Feature: gene Location: 364498-366921 bp Ori: AYW28785.1 Feature: domain Description: HsdM Location: 364519-366463 bp Feature: domain Description: HsdM Location: 364519-366463 bp Feature: gene Location: 2606708-2607405 bp Feature: domain Description: InsE Location: 2606738-2607002 bp Feature: domain Description: InsE Location: 2 606738-2 607002 bp Feature: gene Location: 2607398-2607769 bp Feature: gene Location: 2608078-2609586 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2608336-2609068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 608336-2 609068 bp Feature: domain Description: GIIM Note: maturase Location: 2609143-2609362 bp Feature: domain Description: GIIM Note: maturase Location: 2 609143-2 609362 bp Feature: gene Location: 2609667-2610128 bp Feature: domain Description: PHA02517 Location: 2609670-2610120 bp Feature: domain Description: PHA02 517 Location: 2 609670-2 61012 0 bp Feature: gene Location: 2610237-2610578 bp Ori: AYW30764.1 Feature: domain Description: PHA02517 Location: 2610267-2610570 bp Feature: domain Description: PHA02 517 Location: 2 6102 67-2 610570 bp Feature: gene Location: 2949267-2950628 bp Ori: AYW31075.1 Feature: domain Description: DcuC Location: 2949270-2950602 bp Feature: domain Description: DcuC Location: 2 9492 70-2 950602 bp Feature: gene Location: 2950681-2950908 bp Feature: gene Location: 2951274-2951720 bp Ori: AYW31076.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2951580-2951682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 951580-2 951682 bp Feature: gene Location: 2951672-2951836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2951675-2951831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 951675-2 951831 bp Feature: gene Location: 2951863-2952086 bp Feature: gene Location: 2952244-2953275 bp Ori: AYW31077.1 Feature: domain Description: Asparaginase_2 Location: 2952334-2953267 bp Feature: domain Description: Asparaginase_2 Location: 2 952 334-2 9532 67 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), HsdM (COG0286), DcuC (TIGR00771), Asparaginase_2 (pfam01112)