myRT

myRT report for GCA_003795065.1_ASM379506v1

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Seq: CP033426.1 Lactobacillus crispatus strain CO3MRSI1 chromosome, complete genome (2345902 bp)
Overview 1 RT 1: 1435470-1439076 bp 2 RT 2: 2092350-2096631 bp Neighborhood of RT #1 [1435470, 1439076] DUF3100 RVT-GII TIGR02452 SlpA Neighborhood of RT #2 [2092350, 2097149] PRK09311 ribH RVT-GII group_II_RT_mat DDE_5 Feature: gene Location: 1435470-1436288 bp Feature: domain Description: DUF3100 Location: 1435530-1436232 bp Feature: domain Description: DUF31 00 Location: 1 435530-1 436232 bp Feature: gene Location: 1436470-1436772 bp Feature: gene Location: 1436912-1437424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1436921-1437113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 436921 -1 4371 1 3 bp Feature: domain Description: TIGR02452 Location: 1437251-1437410 bp Feature: domain Description: TIGR02452 Location: 1 437251 -1 43741 0 bp Feature: gene Location: 1437509-1438303 bp Feature: domain Description: SlpA Location: 1438139-1438295 bp Feature: domain Description: SlpA Location: 1 4381 39-1 438295 bp Feature: gene Location: 1438483-1439076 bp Feature: gene Location: 2092350-2093528 bp Feature: domain Description: PRK09311 Location: 2092359-2093523 bp Feature: domain Description: PRK0931 1 Location: 2092359-2093523 bp Feature: gene Location: 2093543-2094007 bp Feature: domain Description: ribH Location: 2093546-2094002 bp Feature: domain Description: ribH Location: 2093546-2094002 bp Feature: gene Location: 2094085-2094582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2094088-2094166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2094088-20941 66 bp Feature: gene Location: 2094708-2094890 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2094741-2094861 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2094741 -2094861 bp Feature: gene Location: 2095746-2097149 bp Feature: domain Description: DDE_5 Location: 2095968-2096631 bp Feature: domain Description: DDE_5 Location: 2095968-2096631 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3100 (pfam11299), RVT-GII, TIGR02452 (TIGR02452 family protein), SlpA (COG1047), PRK09311 (bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II), ribH (PRK00061), group_II_RT_mat (TIGR04416), DDE_5 (pfam13546)