myRT

myRT report for GCA_003798145.1_ASM379814v1

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Seq: CP033685.1 Pseudomonas aeruginosa strain H26023 chromosome, complete genome (6729216 bp)
Overview 1 RT 1: 638260-648565 bp Neighborhood of RT #1 [638260, 648567] COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 638260-639381 bp Ori: AYW64187.1 Feature: domain Description: COG3177 Location: 638278-639370 bp Feature: domain Description: COG31 77 Location: 638278-639370 bp Feature: gene Location: 639640-639776 bp Feature: gene Location: 640104-641789 bp Ori: AYW64188.1 Gene: ltrA Feature: domain Description: RVT_N Location: 640161-640401 bp Feature: domain Description: RVT_N Location: 6401 61 -640401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 640449-641085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 640449-641 085 bp Feature: domain Description: GIIM Note: maturase Location: 641139-641370 bp Feature: domain Description: GIIM Note: maturase Location: 641 1 39-641 370 bp Feature: domain Description: HNH Note: nucleases Location: 641622-641760 bp Feature: domain Description: HNH Note: nucleases Location: 641 622-641 760 bp Feature: gene Location: 642870-646607 bp Ori: AYW64189.1 Feature: domain Description: PBP2_BvgS_HisK_like Location: 642978-643635 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 642978-643635 bp Feature: domain Description: PRK09776 Location: 643848-644319 bp Feature: domain Description: PRK09776 Location: 643848-64431 9 bp Feature: domain Description: PAS Location: 644364-644901 bp Feature: domain Description: PAS Location: 644364-644901 bp Feature: domain Description: PRK10060 Location: 644910-646557 bp Feature: domain Description: PRK1 0060 Location: 64491 0-646557 bp Feature: gene Location: 646714-648567 bp Ori: AYW64190.1 Gene: rpoD Feature: domain Description: PRK05658 Location: 646726-648565 bp Feature: domain Description: PRK05658 Location: 646726-648565 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3177 (Fic family protein ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)