myRT

myRT report for GCA_003812105.1_ASM381210v1

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Seq: CP033774.1 Klebsiella pneumoniae strain FDAARGOS_531 plasmid unnamed1, complete sequence (184336 bp)
Overview 1 RT 1: 64917-67998 bp Neighborhood of RT #1 [64917, 68012] DUF1472 RVT-GII PRK10276 Feature: gene Location: 64917-65009 bp Feature: domain Description: DUF1472 Location: 64929-64995 bp Feature: domain Description: DUF1 472 Location: 64929-64995 bp Feature: gene Location: 65233-65463 bp Feature: gene Location: 65697-67181 bp Ori: AYY30707.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66099-66789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66099-66789 bp Feature: gene Location: 67181-67432 bp Feature: gene Location: 67587-68012 bp Ori: AYY30709.1 Feature: domain Description: PRK10276 Location: 67590-67998 bp Feature: domain Description: PRK1 0276 Location: 67590-67998 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1472 (pfam07339), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP033777.1 Klebsiella pneumoniae strain FDAARGOS_531 chromosome, complete genome (5423408 bp)
Overview 1 RT 1: 1392542-1400236 bp 2 RT 2: 2144628-2147585 bp 3 RT 3: 3859767-3863866 bp 4 RT 4: 4235405-4239447 bp Neighborhood of RT #1 [1392542, 1400236] FimC FimD RVT-UG4 EAL Neighborhood of RT #2 [2144628, 2147785] RVT-GII PRK10276 Neighborhood of RT #3 [3859767, 3863877] umuC PRK10276 RVT-GII DinI Neighborhood of RT #4 [4235405, 4240302] RVT-GII Phage_GPA Feature: gene Location: 1392542-1393306 bp Ori: AYY32222.1 Feature: domain Description: FimC Location: 1392587-1393289 bp Feature: domain Description: FimC Location: 1392 587-13932 89 bp Feature: gene Location: 1393353-1395947 bp Ori: AYY32223.1 Feature: domain Description: FimD Location: 1393395-1395936 bp Feature: domain Description: FimD Location: 1393395-1395936 bp Feature: gene Location: 1395947-1397977 bp Ori: AYY35884.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1396355-1396799 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1396355-1396799 bp Feature: gene Location: 1398653-1400039 bp Feature: domain Description: EAL Location: 1399298-1399568 bp Feature: domain Description: EAL Location: 13992 98-1399568 bp Feature: gene Location: 1400135-1400236 bp Feature: gene Location: 2144628-2144957 bp Feature: gene Location: 2145411-2145662 bp Feature: gene Location: 2145662-2147146 bp Ori: AYY32926.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2146064-2146754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 146064-2 146754 bp Feature: gene Location: 2147220-2147459 bp Feature: gene Location: 2147462-2147785 bp Ori: AYY32928.1 Feature: domain Description: PRK10276 Location: 2147465-2147585 bp Feature: domain Description: PRK102 76 Location: 2 147465-2 147585 bp Feature: gene Location: 3859767-3861032 bp Ori: AYY34445.1 Gene: umuC Feature: domain Description: umuC Location: 3859770-3861030 bp Feature: domain Description: umuC Location: 3859770-3861030 bp Feature: gene Location: 3861035-3861454 bp Ori: AYY34446.1 Feature: domain Description: PRK10276 Location: 3861038-3861449 bp Feature: domain Description: PRK102 76 Location: 3861038-3861449 bp Feature: gene Location: 3861533-3863017 bp Ori: AYY34447.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3861935-3862625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3861935-3862 62 5 bp Feature: gene Location: 3863017-3863268 bp Feature: gene Location: 3863635-3863877 bp Ori: AYY34449.1 Feature: domain Description: DinI Location: 3863686-3863866 bp Feature: domain Description: DinI Location: 3863686-3863866 bp Feature: gene Location: 4235405-4235635 bp Feature: gene Location: 4235710-4235895 bp Feature: gene Location: 4235971-4237455 bp Ori: AYY34774.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4236373-4237063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 36373-42 37063 bp Feature: gene Location: 4237455-4237706 bp Feature: gene Location: 4237920-4240302 bp Feature: domain Description: Phage_GPA Location: 4238484-4239447 bp Feature: domain Description: Phage_GPA Location: 42 38484-42 39447 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, EAL (smart00052), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), DinI (pfam06183), Phage_GPA (pfam05840)