myRT

myRT report for GCA_003812145.1_ASM381214v1

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Seq: CP033800.1 Enterobacter roggenkampii strain FDAARGOS_523 chromosome, complete genome (4879214 bp)
Overview 1 RT 1: 228984-232548 bp 2 RT 2: 312860-317047 bp 3 RT 3: 791481-794834 bp 4 RT 4: 1855867-1866579 bp 5 RT 5: 2445441-2449116 bp 6 RT 6: 4418059-4422100 bp Neighborhood of RT #1 [228984, 232548] PHA02517 YkfC RVT-GII GIIM PHA02517 Neighborhood of RT #2 [312860, 317076] PHA02517 RVT-GII GIIM PHA02517 EAL Neighborhood of RT #3 [791481, 794860] PHA02517 RVT-GII GIIM PHA02517 DUF1656 Neighborhood of RT #4 [1855867, 1866593] fruct_sucro_rep RVT-GII GIIM PHA02517 HTH_38 Tra8 PHA02517 RVT-GII GIIM PRK10217 rmlA Neighborhood of RT #5 [2445441, 2449124] PHA02517 RVT-GII GIIM PHA02517 VOC_BsYyaH Neighborhood of RT #6 [4418059, 4422216] PHA02517 YkfC RVT-GII GIIM COG3547 Feature: gene Location: 228984-229409 bp Feature: domain Description: PHA02517 Location: 229005-229344 bp Feature: domain Description: PHA0251 7 Location: 229005-229344 bp Feature: gene Location: 230001-230168 bp Feature: domain Description: YkfC Location: 230010-230151 bp Feature: domain Description: YkfC Location: 23001 0-2301 51 bp Feature: gene Location: 230177-231523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 230273-231005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 230273-231 005 bp Feature: domain Description: GIIM Note: maturase Location: 231080-231278 bp Feature: domain Description: GIIM Note: maturase Location: 231 080-231 278 bp Feature: gene Location: 231646-232062 bp Feature: domain Description: PHA02517 Location: 231649-232054 bp Feature: domain Description: PHA0251 7 Location: 231 649-232054 bp Feature: gene Location: 232159-232548 bp Feature: gene Location: 312860-313030 bp Feature: gene Location: 313489-313914 bp Feature: domain Description: PHA02517 Location: 313510-313849 bp Feature: domain Description: PHA0251 7 Location: 31 351 0-31 3849 bp Feature: gene Location: 314506-316029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 314779-315511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 4779-31 551 1 bp Feature: domain Description: GIIM Note: maturase Location: 315586-315784 bp Feature: domain Description: GIIM Note: maturase Location: 31 5586-31 5784 bp Feature: gene Location: 316152-316568 bp Feature: domain Description: PHA02517 Location: 316155-316560 bp Feature: domain Description: PHA0251 7 Location: 31 61 55-31 6560 bp Feature: gene Location: 316669-317076 bp Feature: domain Description: EAL Location: 316675-317047 bp Feature: domain Description: EAL Location: 31 6675-31 7047 bp Feature: gene Location: 791481-791906 bp Feature: domain Description: PHA02517 Location: 791502-791841 bp Feature: domain Description: PHA0251 7 Location: 791 502-791 841 bp Feature: gene Location: 792207-792473 bp Feature: gene Location: 792497-794020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 792770-793502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 792770-793502 bp Feature: domain Description: GIIM Note: maturase Location: 793577-793775 bp Feature: domain Description: GIIM Note: maturase Location: 793577-793775 bp Feature: gene Location: 794143-794559 bp Feature: domain Description: PHA02517 Location: 794146-794551 bp Feature: domain Description: PHA0251 7 Location: 7941 46-794551 bp Feature: gene Location: 794624-794860 bp Feature: domain Description: DUF1656 Location: 794678-794834 bp Feature: domain Description: DUF1 656 Location: 794678-794834 bp Feature: gene Location: 1855867-1856871 bp Feature: domain Description: fruct_sucro_rep Location: 1855888-1856866 bp Feature: domain Description: fruct_sucro_rep Location: 1 855888-1 856866 bp Feature: gene Location: 1857013-1857192 bp Feature: gene Location: 1857305-1858828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1857578-1858310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 857578-1 85831 0 bp Feature: domain Description: GIIM Note: maturase Location: 1858385-1858583 bp Feature: domain Description: GIIM Note: maturase Location: 1 858385-1 858583 bp Feature: gene Location: 1859420-1859845 bp Feature: domain Description: PHA02517 Location: 1859444-1859780 bp Feature: domain Description: PHA0251 7 Location: 1 859444-1 859780 bp Feature: gene Location: 1859921-1861072 bp Feature: domain Description: HTH_38 Location: 1859930-1860044 bp Feature: domain Description: HTH_38 Location: 1 859930-1 860044 bp Feature: domain Description: Tra8 Location: 1860080-1861061 bp Feature: domain Description: Tra8 Location: 1 860080-1 861 061 bp Feature: gene Location: 1861219-1861371 bp Feature: gene Location: 1861416-1861628 bp Feature: domain Description: PHA02517 Location: 1861419-1861563 bp Feature: domain Description: PHA0251 7 Location: 1 861 41 9-1 861 563 bp Feature: gene Location: 1862220-1863743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1862493-1863225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 862493-1 863225 bp Feature: domain Description: GIIM Note: maturase Location: 1863300-1863498 bp Feature: domain Description: GIIM Note: maturase Location: 1 863300-1 863498 bp Feature: gene Location: 1864645-1865709 bp Feature: domain Description: PRK10217 Location: 1864651-1865704 bp Feature: domain Description: PRK1 021 7 Location: 1 864651 -1 865704 bp Feature: gene Location: 1865724-1866593 bp Feature: domain Description: rmlA Location: 1865730-1866579 bp Feature: domain Description: rmlA Location: 1 865730-1 866579 bp Feature: gene Location: 2445441-2445866 bp Feature: domain Description: PHA02517 Location: 2445462-2445801 bp Feature: domain Description: PHA0251 7 Location: 2445462-2445801 bp Feature: gene Location: 2446167-2446433 bp Feature: gene Location: 2446457-2447980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2446730-2447462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2446730-2447462 bp Feature: domain Description: GIIM Note: maturase Location: 2447537-2447735 bp Feature: domain Description: GIIM Note: maturase Location: 2447537-2447735 bp Feature: gene Location: 2448103-2448519 bp Feature: domain Description: PHA02517 Location: 2448106-2448511 bp Feature: domain Description: PHA0251 7 Location: 24481 06-244851 1 bp Feature: gene Location: 2448738-2449124 bp Feature: domain Description: VOC_BsYyaH Location: 2448747-2449116 bp Feature: domain Description: VOC_BsYyaH Location: 2448747-24491 1 6 bp Feature: gene Location: 4418059-4418484 bp Feature: domain Description: PHA02517 Location: 4418083-4418419 bp Feature: domain Description: PHA0251 7 Location: 441 8083-441 841 9 bp Feature: gene Location: 4419076-4419423 bp Feature: domain Description: YkfC Location: 4419085-4419388 bp Feature: domain Description: YkfC Location: 441 9085-441 9388 bp Feature: gene Location: 4419390-4420598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4419393-4420080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 441 9393-4420080 bp Feature: domain Description: GIIM Note: maturase Location: 4420155-4420353 bp Feature: domain Description: GIIM Note: maturase Location: 44201 55-4420353 bp Feature: gene Location: 4420685-4420891 bp Feature: gene Location: 4421140-4422216 bp Feature: domain Description: COG3547 Location: 4421179-4422100 bp Feature: domain Description: COG3547 Location: 4421 1 79-44221 00 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), YkfC (COG3344), RVT-GII, GIIM (pfam08388), EAL (smart00052), DUF1656 (pfam07869), fruct_sucro_rep (TIGR02417), HTH_38 (pfam13936), Tra8 (COG2826), PRK10217 (dTDP-glucose 4,6-dehydratase; Provisional)
rmlA (TIGR01207), VOC_BsYyaH (cd07241), COG3547 (Transposase )

Seq: CP033798.1 Enterobacter roggenkampii strain FDAARGOS_523 plasmid unnamed2, complete sequence (103835 bp)
Overview 1 RT 1: 66924-70159 bp Neighborhood of RT #1 [66924, 70224] DDE_Tnp_Tn3 PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 66924-67148 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 66966-67080 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 66966-67080 bp Feature: gene Location: 67145-67561 bp Feature: domain Description: PHA02517 Location: 67148-67553 bp Feature: domain Description: PHA02 517 Location: 67148-67553 bp Feature: gene Location: 67684-69207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67957-68689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67957-68689 bp Feature: domain Description: GIIM Note: maturase Location: 68764-68962 bp Feature: domain Description: GIIM Note: maturase Location: 68764-68962 bp Feature: gene Location: 69161-69586 bp Feature: gene Location: 69799-70224 bp Feature: domain Description: PHA02517 Location: 69820-70159 bp Feature: domain Description: PHA02 517 Location: 6982 0-70159 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_Tn3 (pfam01526), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)