myRT

myRT report for GCA_003813025.1_ASM381302v1

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Seq: CP033835.1 Pseudomonas aeruginosa strain FDAARGOS_570 chromosome, complete genome (7119105 bp)
Overview 1 RT 1: 6527694-6537991 bp Neighborhood of RT #1 [6527694, 6538002] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 6527694-6529547 bp Ori: AYZ87282.1 Gene: rpoD Feature: domain Description: PRK05658 Location: 6527706-6529545 bp Feature: domain Description: PRK05658 Location: 6527706-6529545 bp Feature: gene Location: 6529654-6533391 bp Ori: AYZ87283.1 Feature: domain Description: PBP2_BvgS_HisK_like Location: 6529762-6530419 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 6529762-653041 9 bp Feature: domain Description: PRK09776 Location: 6530632-6531103 bp Feature: domain Description: PRK09776 Location: 6530632-6531 1 03 bp Feature: domain Description: PAS Location: 6531175-6531685 bp Feature: domain Description: PAS Location: 6531 1 75-6531 685 bp Feature: domain Description: PRK10060 Location: 6531694-6533341 bp Feature: domain Description: PRK1 0060 Location: 6531 694-6533341 bp Feature: gene Location: 6534472-6536157 bp Ori: AYZ87284.1 Gene: ltrA Feature: domain Description: RVT_N Location: 6534529-6534769 bp Feature: domain Description: RVT_N Location: 6534529-6534769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6534817-6535453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 653481 7-6535453 bp Feature: domain Description: GIIM Note: maturase Location: 6535507-6535738 bp Feature: domain Description: GIIM Note: maturase Location: 6535507-6535738 bp Feature: domain Description: HNH Note: nucleases Location: 6535990-6536128 bp Feature: domain Description: HNH Note: nucleases Location: 6535990-65361 28 bp Feature: gene Location: 6536485-6536622 bp Feature: gene Location: 6536881-6538002 bp Ori: AYZ87286.1 Feature: domain Description: COG3177 Location: 6536899-6537991 bp Feature: domain Description: COG31 77 Location: 6536899-6537991 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), COG3177 (Fic family protein )