myRT

myRT report for GCA_003815735.1_ASM381573v1

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Seq: CP033923.1 Chryseobacterium nakagawai strain G0041 chromosome, complete genome (5595345 bp)
Overview 1 RT 1: 836437-843074 bp 2 RT 2: 1239390-1244940 bp 3 RT 3: 4704560-4711184 bp Neighborhood of RT #1 [836437, 843082] Bac_Flav_CT_J DUF4141 RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Neighborhood of RT #2 [1239390, 1245041] Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G DUF4141 VirB5 Neighborhood of RT #3 [4704560, 4711204] Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc DUF4141 Bac_Flav_CT_J Feature: gene Location: 836437-837429 bp Ori: AZA89813.1 Gene: traJ Feature: domain Description: Bac_Flav_CT_J Location: 836449-837409 bp Feature: domain Description: Bac_Flav_CT_J Location: 836449-837409 bp Feature: gene Location: 837431-838063 bp Ori: AZA89814.1 Feature: domain Description: DUF4141 Location: 837455-837602 bp Feature: domain Description: DUF41 41 Location: 837455-837602 bp Feature: gene Location: 838324-840138 bp Ori: AZA89815.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 838588-839410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 838588-83941 0 bp Feature: domain Description: Intron_maturas2 Location: 839539-839761 bp Feature: domain Description: Intron_maturas2 Location: 839539-839761 bp Feature: domain Description: HNHc Note: nucleases Location: 839941-840109 bp Feature: domain Description: HNHc Note: nucleases Location: 839941 -8401 09 bp Feature: gene Location: 840178-840729 bp Feature: gene Location: 840689-843082 bp Ori: AZA89817.1 Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 840692-843074 bp Feature: domain Description: Bac_Flav_CT_G Location: 840692-843074 bp Feature: gene Location: 1239390-1241783 bp Ori: AZA90123.1 Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 1239393-1241775 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 239393-1 241 775 bp Feature: gene Location: 1241752-1242294 bp Feature: gene Location: 1242334-1244148 bp Ori: AZA90125.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1242598-1243420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 242598-1 243420 bp Feature: domain Description: Intron_maturas2 Location: 1243549-1243771 bp Feature: domain Description: Intron_maturas2 Location: 1 243549-1 243771 bp Feature: domain Description: HNHc Note: nucleases Location: 1243951-1244119 bp Feature: domain Description: HNHc Note: nucleases Location: 1 243951 -1 2441 1 9 bp Feature: gene Location: 1244258-1244380 bp Feature: domain Description: Bac_Flav_CT_G Location: 1244261-1244357 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 244261 -1 244357 bp Feature: gene Location: 1244409-1245041 bp Ori: AZA90126.1 Feature: domain Description: DUF4141 Location: 1244424-1244580 bp Feature: domain Description: DUF41 41 Location: 1 244424-1 244580 bp Feature: domain Description: VirB5 Location: 1244718-1244940 bp Feature: domain Description: VirB5 Location: 1 24471 8-1 244940 bp Feature: gene Location: 4704560-4706953 bp Ori: AZA93000.1 Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 4704563-4706945 bp Feature: domain Description: Bac_Flav_CT_G Location: 4704563-4706945 bp Feature: gene Location: 4706925-4707464 bp Feature: gene Location: 4707504-4709318 bp Ori: AZA93002.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4707768-4708590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4707768-4708590 bp Feature: domain Description: Intron_maturas2 Location: 4708719-4708941 bp Feature: domain Description: Intron_maturas2 Location: 470871 9-4708941 bp Feature: domain Description: HNHc Note: nucleases Location: 4709121-4709289 bp Feature: domain Description: HNHc Note: nucleases Location: 47091 21 -4709289 bp Feature: gene Location: 4709578-4710210 bp Ori: AZA93003.1 Feature: domain Description: DUF4141 Location: 4709602-4709749 bp Feature: domain Description: DUF41 41 Location: 4709602-4709749 bp Feature: gene Location: 4710212-4711204 bp Ori: AZA93004.1 Gene: traJ Feature: domain Description: Bac_Flav_CT_J Location: 4710224-4711184 bp Feature: domain Description: Bac_Flav_CT_J Location: 471 0224-471 1 1 84 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_J (TIGR03782), DUF4141 (pfam13605), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Bac_Flav_CT_G (TIGR03783), VirB5 (TIGR02791)