myRT

myRT report for GCA_003815755.1_ASM381575v1

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Seq: CP033925.1 Chryseobacterium lactis strain G0197 chromosome, complete genome (5618200 bp)
Overview 1 RT 1: 2373658-2379300 bp 2 RT 2: 3936876-3942378 bp Neighborhood of RT #1 [2373658, 2379308] DUF4141 VirB5 Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Neighborhood of RT #2 [3936876, 3942378] groEL RVT-UG7 Feature: gene Location: 2373658-2374290 bp Ori: AZB04453.1 Feature: domain Description: DUF4141 Location: 2373676-2373829 bp Feature: domain Description: DUF41 41 Location: 2373676-2373829 bp Feature: domain Description: VirB5 Location: 2373967-2374177 bp Feature: domain Description: VirB5 Location: 2373967-23741 77 bp Feature: gene Location: 2374318-2374440 bp Feature: domain Description: Bac_Flav_CT_G Location: 2374321-2374417 bp Feature: domain Description: Bac_Flav_CT_G Location: 2374321 -237441 7 bp Feature: gene Location: 2374550-2376424 bp Ori: AZB04454.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2374874-2375696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2374874-2375696 bp Feature: domain Description: Intron_maturas2 Location: 2375831-2376047 bp Feature: domain Description: Intron_maturas2 Location: 2375831 -2376047 bp Feature: domain Description: HNHc Note: nucleases Location: 2376224-2376395 bp Feature: domain Description: HNHc Note: nucleases Location: 2376224-2376395 bp Feature: gene Location: 2376404-2376946 bp Feature: gene Location: 2376915-2379308 bp Ori: AZB04456.1 Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 2376918-2379300 bp Feature: domain Description: Bac_Flav_CT_G Location: 237691 8-2379300 bp Feature: gene Location: 3936876-3938501 bp Ori: AZB05738.1 Gene: groL Feature: domain Description: groEL Location: 3936879-3938493 bp Feature: domain Description: groEL Location: 3936879-3938493 bp Feature: gene Location: 3938685-3939254 bp Feature: gene Location: 3939573-3941165 bp Ori: AZB05740.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 3939957-3940374 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 3939957-3940374 bp Feature: gene Location: 3941162-3941893 bp Feature: gene Location: 3942121-3942378 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4141 (pfam13605), VirB5 (TIGR02791), Bac_Flav_CT_G (TIGR03783), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), groEL (PRK12852), RVT-UG7