myRT

myRT report for GCA_003815775.1_ASM381577v1

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Seq: CP033926.1 Chryseobacterium joostei strain DSM 16927 chromosome, complete genome (4860412 bp)
Overview 1 RT 1: 556048-565384 bp 2 RT 2: 2236422-2239544 bp 3 RT 3: 2603769-2614822 bp Neighborhood of RT #1 [556048, 565384] Sigma54_activ_2 COG3177 RVT-UG3 RVT-UG8 Neighborhood of RT #2 [2236422, 2239544] HNH_5 RVT-Retrons HTH_19 Neighborhood of RT #3 [2603769, 2614822] recomb_XerC rpsU AE_Prim_S_like RVT-UG10 Feature: gene Location: 556048-560397 bp Ori: AZA98571.1 Feature: domain Description: Sigma54_activ_2 Location: 556270-556696 bp Feature: domain Description: Sigma54_activ_2 Location: 556270-556696 bp Feature: gene Location: 560441-561412 bp Ori: AZA98572.1 Feature: domain Description: COG3177 Location: 560456-561398 bp Feature: domain Description: COG31 77 Location: 560456-561 398 bp Feature: gene Location: 561426-562892 bp Ori: AZA98573.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 561843-562386 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 561 843-562386 bp Feature: gene Location: 562889-564409 bp Ori: AZA98574.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 563516-563966 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 56351 6-563966 bp Feature: gene Location: 564420-565187 bp Feature: gene Location: 565184-565384 bp Feature: gene Location: 2236422-2237372 bp Ori: AZA99996.1 Feature: domain Description: HNH_5 Location: 2236536-2236677 bp Feature: domain Description: HNH_5 Location: 2236536-2236677 bp Feature: gene Location: 2237366-2238127 bp Feature: gene Location: 2238167-2238985 bp Ori: AZA99998.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2238305-2238827 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2238305-2238827 bp Feature: gene Location: 2238969-2239271 bp Ori: AZA99999.1 Feature: domain Description: HTH_19 Location: 2238981-2239143 bp Feature: domain Description: HTH_1 9 Location: 2238981 -22391 43 bp Feature: gene Location: 2239308-2239544 bp Feature: gene Location: 2603769-2604656 bp Ori: AZB00305.1 Feature: domain Description: recomb_XerC Location: 2603781-2604642 bp Feature: domain Description: recomb_XerC Location: 2603781 -2604642 bp Feature: gene Location: 2604732-2604929 bp Ori: AZB00306.1 Feature: domain Description: rpsU Location: 2604735-2604906 bp Feature: domain Description: rpsU Location: 2604735-2604906 bp Feature: gene Location: 2606087-2611690 bp Ori: AZB00307.1 Feature: domain Description: AE_Prim_S_like Location: 2606186-2606498 bp Feature: domain Description: AE_Prim_S_like Location: 26061 86-2606498 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 2607461-2608124 bp Feature: RT Description: RVT-UG1 0 Note: UG1 0 RT Location: 2607461 -26081 24 bp Feature: gene Location: 2611773-2612846 bp Feature: gene Location: 2612873-2614822 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Sigma54_activ_2 (pfam14532), COG3177 (Fic family protein ), RVT-UG3, RVT-UG8, HNH_5 (pfam14279), RVT-Retrons, HTH_19 (pfam12844), recomb_XerC (TIGR02224), rpsU (PRK00270), AE_Prim_S_like (cl01287)
RVT-UG10