myRT

myRT report for GCA_003815875.1_ASM381587v1

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Seq: CP033924.1 Chryseobacterium lactis strain KC_1864 chromosome, complete genome (5618212 bp)
Overview 1 RT 1: 433552-439054 bp 2 RT 2: 4488542-4494184 bp Neighborhood of RT #1 [433552, 439054] groEL RVT-UG7 Neighborhood of RT #2 [4488542, 4494192] DUF4141 VirB5 Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Feature: gene Location: 433552-435177 bp Ori: AZA80736.1 Gene: groL Feature: domain Description: groEL Location: 433555-435169 bp Feature: domain Description: groEL Location: 433555-4351 69 bp Feature: gene Location: 435361-435930 bp Feature: gene Location: 436249-437841 bp Ori: AZA80738.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 436633-437050 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 436633-437050 bp Feature: gene Location: 437838-438569 bp Feature: gene Location: 438797-439054 bp Feature: gene Location: 4488542-4489174 bp Ori: AZA84067.1 Feature: domain Description: DUF4141 Location: 4488560-4488713 bp Feature: domain Description: DUF41 41 Location: 4488560-448871 3 bp Feature: domain Description: VirB5 Location: 4488851-4489061 bp Feature: domain Description: VirB5 Location: 4488851 -4489061 bp Feature: gene Location: 4489202-4489324 bp Feature: domain Description: Bac_Flav_CT_G Location: 4489205-4489301 bp Feature: domain Description: Bac_Flav_CT_G Location: 4489205-4489301 bp Feature: gene Location: 4489434-4491308 bp Ori: AZA84068.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4489758-4490580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4489758-4490580 bp Feature: domain Description: Intron_maturas2 Location: 4490715-4490931 bp Feature: domain Description: Intron_maturas2 Location: 449071 5-4490931 bp Feature: domain Description: HNHc Note: nucleases Location: 4491108-4491279 bp Feature: domain Description: HNHc Note: nucleases Location: 4491 1 08-4491 279 bp Feature: gene Location: 4491288-4491830 bp Feature: gene Location: 4491799-4494192 bp Ori: AZA84070.1 Gene: traG Feature: domain Description: Bac_Flav_CT_G Location: 4491802-4494184 bp Feature: domain Description: Bac_Flav_CT_G Location: 4491 802-44941 84 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groEL (PRK12852), RVT-UG7, DUF4141 (pfam13605), VirB5 (TIGR02791), Bac_Flav_CT_G (TIGR03783), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)