myRT

myRT report for GCA_003815995.1_ASM381599v1

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Seq: CP033935.1 Chryseobacterium balustinum strain KC_1863 plasmid unnamed, complete sequence (108191 bp)
Overview 1 RT 1: 59948-67192 bp Neighborhood of RT #1 [59948, 67413] RVT-Retrons DUF4145 HsdR PIN_3 Feature: gene Location: 59948-60568 bp Feature: gene Location: 60603-61745 bp Feature: gene Location: 61748-62956 bp Ori: AZB32142.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61952-62585 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61 952-62585 bp Feature: gene Location: 63340-66792 bp Ori: AZB32143.1 Feature: domain Description: DUF4145 Location: 63400-63673 bp Feature: domain Description: DUF41 45 Location: 63400-63673 bp Feature: domain Description: HsdR Location: 63982-66730 bp Feature: domain Description: HsdR Location: 63982-66730 bp Feature: gene Location: 66850-67413 bp Ori: AZB32144.1 Feature: domain Description: PIN_3 Location: 66877-67192 bp Feature: domain Description: PIN_3 Location: 66877-671 92 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, DUF4145 (pfam13643), HsdR (COG4096), PIN_3 (pfam13470)

Seq: CP033934.1 Chryseobacterium balustinum strain KC_1863 chromosome, complete genome (4865895 bp)
Overview 1 RT 1: 1221802-1232397 bp 2 RT 2: 2592212-2599647 bp Neighborhood of RT #1 [1221802, 1232402] delta_60_rpt PQQ_3 DUF4438 PQQ_3 DUF4438 Por_Secre_tail FN3 FN3 Laminin_G_3 Por_Secre_tail RVT-UG5 LipB trpA Neighborhood of RT #2 [2592212, 2599778] HHH_3 HHH_3 HHH_3 HHH_3 PRK07726 Toprim_Crpt RVT-UG2 DUF2652 Feature: gene Location: 1221802-1223397 bp Ori: AZB28782.1 Feature: domain Description: delta_60_rpt Location: 1221952-1222060 bp Feature: domain Description: delta_60_rpt Location: 12 2 1952 -12 2 2 060 bp Feature: domain Description: PQQ_3 Location: 1222243-1222345 bp Feature: domain Description: PQQ_3 Location: 12 2 2 2 43-12 2 2 345 bp Feature: domain Description: DUF4438 Location: 1222486-1222576 bp Feature: domain Description: DUF4438 Location: 12 2 2 486-12 2 2 576 bp Feature: domain Description: PQQ_3 Location: 1222756-1222879 bp Feature: domain Description: PQQ_3 Location: 12 2 2 756-12 2 2 879 bp Feature: domain Description: DUF4438 Location: 1223044-1223140 bp Feature: domain Description: DUF4438 Location: 12 2 3044-12 2 3140 bp Feature: domain Description: Por_Secre_tail Location: 1223179-1223395 bp Feature: domain Description: Por_Secre_tail Location: 12 2 3179-12 2 3395 bp Feature: gene Location: 1224379-1227381 bp Ori: AZB28783.1 Feature: domain Description: FN3 Location: 1225801-1226077 bp Feature: domain Description: FN3 Location: 12 2 5801-12 2 6077 bp Feature: domain Description: FN3 Location: 1226152-1226344 bp Feature: domain Description: FN3 Location: 12 2 6152 -12 2 6344 bp Feature: domain Description: Laminin_G_3 Location: 1226593-1227082 bp Feature: domain Description: Laminin_G_3 Location: 12 2 6593-12 2 7082 bp Feature: domain Description: Por_Secre_tail Location: 1227148-1227379 bp Feature: domain Description: Por_Secre_tail Location: 12 2 7148-12 2 7379 bp Feature: gene Location: 1227483-1230692 bp Ori: AZB28784.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1228074-1228545 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 12 2 8074-12 2 8545 bp Feature: gene Location: 1230908-1231636 bp Ori: AZB28785.1 Gene: lipB Feature: domain Description: LipB Location: 1230941-1231607 bp Feature: domain Description: LipB Location: 12 30941-12 31607 bp Feature: gene Location: 1231668-1232402 bp Ori: AZB28786.1 Feature: domain Description: trpA Location: 1231677-1232397 bp Feature: domain Description: trpA Location: 12 31677-12 32 397 bp Feature: gene Location: 2592212-2593519 bp Ori: AZB29938.1 Feature: domain Description: HHH_3 Location: 2592362-2592539 bp Feature: domain Description: HHH_3 Location: 2 592 362 -2 592 539 bp Feature: domain Description: HHH_3 Location: 2592629-2592803 bp Feature: domain Description: HHH_3 Location: 2 592 62 9-2 592 803 bp Feature: domain Description: HHH_3 Location: 2592890-2593067 bp Feature: domain Description: HHH_3 Location: 2 592 890-2 593067 bp Feature: domain Description: HHH_3 Location: 2593148-2593310 bp Feature: domain Description: HHH_3 Location: 2 593148-2 593310 bp Feature: gene Location: 2593630-2595753 bp Ori: AZB29939.1 Feature: domain Description: PRK07726 Location: 2593633-2595568 bp Feature: domain Description: PRK0772 6 Location: 2 593633-2 595568 bp Feature: domain Description: Toprim_Crpt Location: 2595580-2595685 bp Feature: domain Description: Toprim_Crpt Location: 2 595580-2 595685 bp Feature: gene Location: 2595871-2597484 bp Ori: AZB31963.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2596126-2597068 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2 59612 6-2 597068 bp Feature: gene Location: 2597943-2599142 bp Feature: gene Location: 2599224-2599778 bp Ori: AZB29941.1 Feature: domain Description: DUF2652 Location: 2599329-2599647 bp Feature: domain Description: DUF2 652 Location: 2 59932 9-2 599647 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT delta_60_rpt (TIGR02608), PQQ_3 (pfam13570), DUF4438 (pfam14505), Por_Secre_tail (TIGR04183), FN3 (smart00060), Laminin_G_3 (pfam13385), RVT-UG5, LipB (COG0321), trpA (TIGR00262), HHH_3 (pfam12836)
PRK07726 (DNA topoisomerase 3), Toprim_Crpt (pfam13342), RVT-UG2, DUF2652 (pfam10851)