myRT

myRT report for GCA_003850365.1_ASM385036v1

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Seq: CP027709.1 Pseudomonas chlororaphis subsp. piscium strain ATCC 17809 chromosome, complete genome (7218893 bp)
Overview 1 RT 1: 4630257-4634088 bp 2 RT 2: 5541082-5547353 bp Neighborhood of RT #1 [4630257, 4634135] clpP tig RVT_N RVT-GII GIIM HNH Neighborhood of RT #2 [5541082, 5547353] AdoMet_MTases DEXHc_Snf RVT_N RVT-GII GIIM HNHc KOG0389 SF2_C_SNF Feature: gene Location: 4630257-4630898 bp Ori: AZC45172.1 Feature: domain Description: clpP Location: 4630314-4630881 bp Feature: domain Description: clpP Location: 463031 4-4630881 bp Feature: gene Location: 4630992-4632302 bp Ori: AZC45173.1 Feature: domain Description: tig Location: 4630995-4632273 bp Feature: domain Description: tig Location: 4630995-4632273 bp Feature: gene Location: 4632432-4634135 bp Ori: AZC45174.1 Feature: domain Description: RVT_N Location: 4632489-4632732 bp Feature: domain Description: RVT_N Location: 4632489-4632732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4632777-4633413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4632777-463341 3 bp Feature: domain Description: GIIM Note: maturase Location: 4633464-4633698 bp Feature: domain Description: GIIM Note: maturase Location: 4633464-4633698 bp Feature: domain Description: HNH Note: nucleases Location: 4633950-4634088 bp Feature: domain Description: HNH Note: nucleases Location: 4633950-4634088 bp Feature: gene Location: 5541082-5542302 bp Ori: AZC45979.1 Feature: domain Description: AdoMet_MTases Location: 5541205-5541571 bp Feature: domain Description: AdoMet_MTases Location: 5541 205-5541 571 bp Feature: gene Location: 5542402-5543430 bp Ori: AZC45980.1 Feature: domain Description: DEXHc_Snf Location: 5542594-5542852 bp Feature: domain Description: DEXHc_Snf Location: 5542594-5542852 bp Feature: gene Location: 5544029-5545747 bp Ori: AZC45981.1 Feature: domain Description: RVT_N Location: 5544086-5544323 bp Feature: domain Description: RVT_N Location: 5544086-5544323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5544374-5545025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5544374-5545025 bp Feature: domain Description: GIIM Note: maturase Location: 5545079-5545310 bp Feature: domain Description: GIIM Note: maturase Location: 5545079-554531 0 bp Feature: domain Description: HNHc Note: nucleases Location: 5545544-5545700 bp Feature: domain Description: HNHc Note: nucleases Location: 5545544-5545700 bp Feature: gene Location: 5545860-5547074 bp Ori: AZC45982.1 Feature: domain Description: KOG0389 Location: 5545863-5545977 bp Feature: domain Description: KOG0389 Location: 5545863-5545977 bp Feature: domain Description: SF2_C_SNF Location: 5546514-5546910 bp Feature: domain Description: SF2_C_SNF Location: 554651 4-554691 0 bp Feature: gene Location: 5547135-5547353 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT clpP, tig (TIGR00115), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), AdoMet_MTases (cl17173), DEXHc_Snf (cd17919), HNHc (smart00507), KOG0389 (KOG0389, SNF2 family DNA-dependent ATPase )
SF2_C_SNF (cd18793)