myRT

myRT report for GCA_003850385.1_ASM385038v1

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Seq: CP027708.1 Pseudomonas chlororaphis subsp. piscium strain ATCC 17411 chromosome, complete genome (7212397 bp)
Overview 1 RT 1: 4630257-4634088 bp 2 RT 2: 5541077-5547348 bp Neighborhood of RT #1 [4630257, 4634135] clpP tig RVT_N RVT-GII GIIM HNH Neighborhood of RT #2 [5541077, 5547348] AdoMet_MTases DEXHc_Snf RVT_N RVT-GII GIIM HNHc KOG0389 SF2_C_SNF Feature: gene Location: 4630257-4630898 bp Ori: AZC38622.1 Feature: domain Description: clpP Location: 4630314-4630881 bp Feature: domain Description: clpP Location: 463031 4-4630881 bp Feature: gene Location: 4630992-4632302 bp Ori: AZC38623.1 Feature: domain Description: tig Location: 4630995-4632273 bp Feature: domain Description: tig Location: 4630995-4632273 bp Feature: gene Location: 4632432-4634135 bp Ori: AZC38624.1 Feature: domain Description: RVT_N Location: 4632489-4632732 bp Feature: domain Description: RVT_N Location: 4632489-4632732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4632777-4633413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4632777-463341 3 bp Feature: domain Description: GIIM Note: maturase Location: 4633464-4633698 bp Feature: domain Description: GIIM Note: maturase Location: 4633464-4633698 bp Feature: domain Description: HNH Note: nucleases Location: 4633950-4634088 bp Feature: domain Description: HNH Note: nucleases Location: 4633950-4634088 bp Feature: gene Location: 5541077-5542297 bp Ori: AZC39427.1 Feature: domain Description: AdoMet_MTases Location: 5541200-5541566 bp Feature: domain Description: AdoMet_MTases Location: 5541 200-5541 566 bp Feature: gene Location: 5542397-5543425 bp Ori: AZC39428.1 Feature: domain Description: DEXHc_Snf Location: 5542589-5542847 bp Feature: domain Description: DEXHc_Snf Location: 5542589-5542847 bp Feature: gene Location: 5544024-5545742 bp Ori: AZC39429.1 Feature: domain Description: RVT_N Location: 5544081-5544318 bp Feature: domain Description: RVT_N Location: 5544081 -554431 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5544369-5545020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5544369-5545020 bp Feature: domain Description: GIIM Note: maturase Location: 5545074-5545305 bp Feature: domain Description: GIIM Note: maturase Location: 5545074-5545305 bp Feature: domain Description: HNHc Note: nucleases Location: 5545539-5545695 bp Feature: domain Description: HNHc Note: nucleases Location: 5545539-5545695 bp Feature: gene Location: 5545855-5547069 bp Ori: AZC39430.1 Feature: domain Description: KOG0389 Location: 5545858-5545972 bp Feature: domain Description: KOG0389 Location: 5545858-5545972 bp Feature: domain Description: SF2_C_SNF Location: 5546509-5546905 bp Feature: domain Description: SF2_C_SNF Location: 5546509-5546905 bp Feature: gene Location: 5547130-5547348 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT clpP, tig (TIGR00115), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), AdoMet_MTases (cl17173), DEXHc_Snf (cd17919), HNHc (smart00507), KOG0389 (KOG0389, SNF2 family DNA-dependent ATPase )
SF2_C_SNF (cd18793)