myRT

myRT report for GCA_003850445.1_ASM385044v1

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Seq: CP027736.1 Pseudomonas chlororaphis subsp. piscium strain PCL1391 chromosome, complete genome (6870622 bp)
Overview 1 RT 1: 376319-383834 bp Neighborhood of RT #1 [376319, 383992] Arabinose_bd AraC RVT-Retrons AAA_15 TOPRIM_OLD Integrase_1 Feature: gene Location: 376319-377335 bp Ori: AZC60864.1 Feature: domain Description: Arabinose_bd Location: 376391-376934 bp Feature: domain Description: Arabinose_bd Location: 376391 -376934 bp Feature: domain Description: AraC Location: 376994-377285 bp Feature: domain Description: AraC Location: 376994-377285 bp Feature: gene Location: 378134-378988 bp Feature: gene Location: 379479-380432 bp Ori: AZC60866.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 379593-380127 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 379593-3801 27 bp Feature: gene Location: 380580-382406 bp Ori: AZC60867.1 Feature: domain Description: AAA_15 Location: 380583-381780 bp Feature: domain Description: AAA_1 5 Location: 380583-381 780 bp Feature: domain Description: TOPRIM_OLD Location: 381951-382167 bp Feature: domain Description: TOPRIM_OLD Location: 381 951 -3821 67 bp Feature: gene Location: 383012-383992 bp Ori: AZC60868.1 Feature: domain Description: Integrase_1 Location: 383399-383834 bp Feature: domain Description: Integrase_1 Location: 383399-383834 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arabinose_bd (pfam12625), AraC (COG2207), RVT-Retrons, AAA_15 (pfam13175), TOPRIM_OLD (cd01026), Integrase_1 (pfam12835)