myRT

myRT report for GCA_003851905.1_ASM385190v1

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Seq: CP027720.1 Pseudomonas chlororaphis subsp. aureofaciens strain DSM 6698 chromosome, complete genome (7037850 bp)
Overview 1 RT 1: 3964280-3968057 bp 2 RT 2: 6369844-6378760 bp Neighborhood of RT #1 [3964280, 3968065] Avd_like RVT-DGRs Dcm Dcm Neighborhood of RT #2 [6369844, 6378792] NTP_transferase_like_1 COG3178 RVT_N RVT-GII GIIM HNH LptD PRK10770 Feature: gene Location: 3964280-3964867 bp Feature: gene Location: 3964923-3965276 bp Ori: AZD93073.1 Feature: domain Description: Avd_like Location: 3964950-3965256 bp Feature: domain Description: Avd_like Location: 3964950-3965256 bp Feature: gene Location: 3965651-3966646 bp Ori: AZD93074.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3965738-3966494 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3965738-3966494 bp Feature: gene Location: 3966897-3967100 bp Feature: gene Location: 3967142-3968065 bp Ori: AZD93076.1 Feature: domain Description: Dcm Location: 3967148-3967730 bp Feature: domain Description: Dcm Location: 39671 48-3967730 bp Feature: domain Description: Dcm Location: 3967901-3968057 bp Feature: domain Description: Dcm Location: 3967901 -3968057 bp Feature: gene Location: 6369844-6370515 bp Ori: AZD95279.1 Feature: domain Description: NTP_transferase_like_1 Location: 6369850-6370486 bp Feature: domain Description: NTP_transferase_like_1 Location: 6369850-6370486 bp Feature: gene Location: 6370512-6371537 bp Ori: AZD95280.1 Feature: domain Description: COG3178 Location: 6370533-6371514 bp Feature: domain Description: COG31 78 Location: 6370533-6371 51 4 bp Feature: gene Location: 6372840-6374531 bp Ori: AZD95281.1 Feature: domain Description: RVT_N Location: 6372897-6373140 bp Feature: domain Description: RVT_N Location: 6372897-63731 40 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6373185-6373821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63731 85-6373821 bp Feature: domain Description: GIIM Note: maturase Location: 6373872-6374103 bp Feature: domain Description: GIIM Note: maturase Location: 6373872-63741 03 bp Feature: domain Description: HNH Note: nucleases Location: 6374358-6374493 bp Feature: domain Description: HNH Note: nucleases Location: 6374358-6374493 bp Feature: gene Location: 6374694-6377495 bp Ori: AZD95282.1 Feature: domain Description: LptD Location: 6375054-6377478 bp Feature: domain Description: LptD Location: 6375054-6377478 bp Feature: gene Location: 6377470-6378792 bp Ori: AZD95283.1 Feature: domain Description: PRK10770 Location: 6377551-6378760 bp Feature: domain Description: PRK1 0770 Location: 6377551 -6378760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, Dcm (COG0270), NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), LptD (COG1452)
PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)