myRT

myRT report for GCA_003852295.1_ASM385229v1

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Seq: CP027761.1 Pseudomonas sp. R11-23-07 chromosome, complete genome (5689077 bp)
Overview 1 RT 1: 1367839-1375066 bp 2 RT 2: 1613718-1622589 bp 3 RT 3: 2918935-2923973 bp 4 RT 4: 3367543-3377460 bp 5 RT 5: 4417882-4425059 bp Neighborhood of RT #1 [1367839, 1375071] PRK12555 PleD RVT-GII GIIM PRK08787 lysS Neighborhood of RT #2 [1613718, 1622600] pbenz_hydroxyl MFS_Azr1_MDR_like RVT-GII GIIM RVT-GII GIIM sCache_2 sCache_2 PBP2_PheC Neighborhood of RT #3 [2918935, 2923978] AzlC RVT-GII GIIM HTH_ARSR PRK15445 Neighborhood of RT #4 [3367543, 3377462] outer_NodT PRK11512 RVT-GII GIIM TamB TamA Neighborhood of RT #5 [4417882, 4425088] OM_YfiO PRK05826 RVT-GII GIIM PRK05713 TtdA FumA Feature: gene Location: 1367839-1368849 bp Ori: AZF57095.1 Feature: domain Description: PRK12555 Location: 1367842-1368841 bp Feature: domain Description: PRK1 2555 Location: 1 367842-1 368841 bp Feature: gene Location: 1368902-1369903 bp Ori: AZF57096.1 Feature: domain Description: PleD Location: 1368944-1369895 bp Feature: domain Description: PleD Location: 1 368944-1 369895 bp Feature: gene Location: 1370366-1371733 bp Ori: AZF57097.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1370699-1371311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 370699-1 371 31 1 bp Feature: domain Description: GIIM Note: maturase Location: 1371371-1371575 bp Feature: domain Description: GIIM Note: maturase Location: 1 371 371 -1 371 575 bp Feature: gene Location: 1372630-1373472 bp Ori: AZF57098.1 Feature: domain Description: PRK08787 Location: 1372639-1373470 bp Feature: domain Description: PRK08787 Location: 1 372639-1 373470 bp Feature: gene Location: 1373569-1375071 bp Ori: AZF57099.1 Feature: domain Description: lysS Location: 1373611-1375066 bp Feature: domain Description: lysS Location: 1 37361 1 -1 375066 bp Feature: gene Location: 1613718-1614911 bp Ori: AZF57340.1 Feature: domain Description: pbenz_hydroxyl Location: 1613730-1614897 bp Feature: domain Description: pbenz_hydroxyl Location: 1 61 3730-1 61 4897 bp Feature: gene Location: 1614978-1616492 bp Ori: AZF57341.1 Feature: domain Description: MFS_Azr1_MDR_like Location: 1615041-1616454 bp Feature: domain Description: MFS_Azr1 _MDR_like Location: 1 61 5041 -1 61 6454 bp Feature: gene Location: 1616982-1618349 bp Ori: AZF57342.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1617315-1617927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 61 731 5-1 61 7927 bp Feature: domain Description: GIIM Note: maturase Location: 1617987-1618191 bp Feature: domain Description: GIIM Note: maturase Location: 1 61 7987-1 61 81 91 bp Feature: gene Location: 1619088-1620455 bp Ori: AZF57343.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1619421-1620033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 61 9421 -1 620033 bp Feature: domain Description: GIIM Note: maturase Location: 1620093-1620297 bp Feature: domain Description: GIIM Note: maturase Location: 1 620093-1 620297 bp Feature: gene Location: 1620915-1621754 bp Ori: AZF57344.1 Feature: domain Description: sCache_2 Location: 1620981-1621320 bp Feature: domain Description: sCache_2 Location: 1 620981 -1 621 320 bp Feature: domain Description: sCache_2 Location: 1621377-1621725 bp Feature: domain Description: sCache_2 Location: 1 621 377-1 621 725 bp Feature: gene Location: 1621827-1622600 bp Ori: AZF57345.1 Feature: domain Description: PBP2_PheC Location: 1621899-1622589 bp Feature: domain Description: PBP2_PheC Location: 1 621 899-1 622589 bp Feature: gene Location: 2918935-2919630 bp Ori: AZF58510.1 Feature: domain Description: AzlC Location: 2918959-2919613 bp Feature: domain Description: AzlC Location: 291 8959-291 961 3 bp Feature: gene Location: 2919702-2919917 bp Feature: gene Location: 2920690-2922057 bp Ori: AZF58512.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2921023-2921635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2921 023-2921 635 bp Feature: domain Description: GIIM Note: maturase Location: 2921695-2921899 bp Feature: domain Description: GIIM Note: maturase Location: 2921 695-2921 899 bp Feature: gene Location: 2922475-2922675 bp Ori: AZF58513.1 Feature: domain Description: HTH_ARSR Location: 2922502-2922634 bp Feature: domain Description: HTH_ARSR Location: 2922502-2922634 bp Feature: gene Location: 2922695-2923978 bp Ori: AZF58514.1 Feature: domain Description: PRK15445 Location: 2922704-2923973 bp Feature: domain Description: PRK1 5445 Location: 2922704-2923973 bp Feature: gene Location: 3367543-3368994 bp Ori: AZF58930.1 Feature: domain Description: outer_NodT Location: 3367573-3368944 bp Feature: domain Description: outer_NodT Location: 3367573-3368944 bp Feature: gene Location: 3368994-3369464 bp Ori: AZF58931.1 Feature: domain Description: PRK11512 Location: 3369036-3369420 bp Feature: domain Description: PRK1 1 51 2 Location: 3369036-3369420 bp Feature: gene Location: 3370024-3371391 bp Ori: AZF58932.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3370357-3370969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3370357-3370969 bp Feature: domain Description: GIIM Note: maturase Location: 3371029-3371233 bp Feature: domain Description: GIIM Note: maturase Location: 3371 029-3371 233 bp Feature: gene Location: 3372061-3375735 bp Ori: AZF58933.1 Feature: domain Description: TamB Location: 3372064-3375733 bp Feature: domain Description: TamB Location: 3372064-3375733 bp Feature: gene Location: 3375735-3377462 bp Ori: AZF58934.1 Feature: domain Description: TamA Location: 3375807-3377460 bp Feature: domain Description: TamA Location: 3375807-3377460 bp Feature: gene Location: 4417882-4418256 bp Ori: AZF59876.1 Feature: domain Description: OM_YfiO Location: 4418101-4418203 bp Feature: domain Description: OM_YfiO Location: 441 81 01 -441 8203 bp Feature: gene Location: 4418430-4419881 bp Ori: AZF59877.1 Feature: domain Description: PRK05826 Location: 4418439-4419834 bp Feature: domain Description: PRK05826 Location: 441 8439-441 9834 bp Feature: gene Location: 4420352-4421719 bp Ori: AZF59878.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4420685-4421297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4420685-4421 297 bp Feature: domain Description: GIIM Note: maturase Location: 4421357-4421561 bp Feature: domain Description: GIIM Note: maturase Location: 4421 357-4421 561 bp Feature: gene Location: 4422416-4423348 bp Ori: AZF59879.1 Feature: domain Description: PRK05713 Location: 4422419-4423343 bp Feature: domain Description: PRK0571 3 Location: 442241 9-4423343 bp Feature: gene Location: 4423565-4425088 bp Ori: AZF59880.1 Feature: domain Description: TtdA Location: 4423568-4424456 bp Feature: domain Description: TtdA Location: 4423568-4424456 bp Feature: domain Description: FumA Location: 4424513-4425059 bp Feature: domain Description: FumA Location: 442451 3-4425059 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12555 (chemotaxis-specific protein-glutamate methyltransferase CheB), PleD (COG3706), RVT-GII, GIIM (pfam08388), PRK08787 (peptide chain release factor 2; Provisional), lysS (PRK02983), pbenz_hydroxyl (TIGR02360), MFS_Azr1_MDR_like (cd17502), sCache_2 (pfam17200), PBP2_PheC (cd01069)
AzlC (pfam03591), HTH_ARSR (smart00418), PRK15445 (arsenical efflux pump membrane protein ArsB), outer_NodT (TIGR01845), PRK11512 (multiple antibiotic resistance transcriptional regulator MarR), TamB (pfam04357), TamA (COG0729), OM_YfiO (TIGR03302), PRK05826 (pyruvate kinase; Provisional), PRK05713 (iron-sulfur-binding ferredoxin reductase)
TtdA (COG1951), FumA (COG1838)