myRT

myRT report for GCA_003852355.1_ASM385235v1

Download annotations/find similar RTs

Seq: CP027759.1 Pseudomonas sp. R2-7-07 chromosome, complete genome (5799132 bp)
Overview 1 RT 1: 1733067-1740107 bp 2 RT 2: 2467589-2472810 bp 3 RT 3: 3045767-3050803 bp 4 RT 4: 4547232-4554409 bp Neighborhood of RT #1 [1733067, 1740118] pbenz_hydroxyl MFS_Azr1_MDR_like RVT-GII GIIM sCache_2 sCache_2 PBP2_PheC Neighborhood of RT #2 [2467589, 2472830] SgaA_N_like SgaA_N_like CAD1 RVT-GII GIIM PAS HTH_LUXR Neighborhood of RT #3 [3045767, 3050808] AzlC RVT-GII GIIM HTH_ARSR PRK15445 Neighborhood of RT #4 [4547232, 4554438] OM_YfiO PRK05826 RVT-GII GIIM PRK05713 TtdA FumA Feature: gene Location: 1733067-1734260 bp Ori: AZF46829.1 Feature: domain Description: pbenz_hydroxyl Location: 1733079-1734246 bp Feature: domain Description: pbenz_hydroxyl Location: 1 733079-1 734246 bp Feature: gene Location: 1734327-1735841 bp Ori: AZF46830.1 Feature: domain Description: MFS_Azr1_MDR_like Location: 1734390-1735803 bp Feature: domain Description: MFS_Azr1 _MDR_like Location: 1 734390-1 735803 bp Feature: gene Location: 1736606-1737973 bp Ori: AZF46831.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1736939-1737551 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 736939-1 737551 bp Feature: domain Description: GIIM Note: maturase Location: 1737611-1737815 bp Feature: domain Description: GIIM Note: maturase Location: 1 73761 1 -1 73781 5 bp Feature: gene Location: 1738433-1739272 bp Ori: AZF46832.1 Feature: domain Description: sCache_2 Location: 1738499-1738838 bp Feature: domain Description: sCache_2 Location: 1 738499-1 738838 bp Feature: domain Description: sCache_2 Location: 1738895-1739243 bp Feature: domain Description: sCache_2 Location: 1 738895-1 739243 bp Feature: gene Location: 1739345-1740118 bp Ori: AZF46833.1 Feature: domain Description: PBP2_PheC Location: 1739417-1740107 bp Feature: domain Description: PBP2_PheC Location: 1 73941 7-1 7401 07 bp Feature: gene Location: 2467589-2468485 bp Ori: AZF47510.1 Feature: domain Description: SgaA_N_like Location: 2467922-2468051 bp Feature: domain Description: SgaA_N_like Location: 2467922-2468051 bp Feature: domain Description: SgaA_N_like Location: 2468321-2468459 bp Feature: domain Description: SgaA_N_like Location: 2468321 -2468459 bp Feature: gene Location: 2468633-2469700 bp Ori: AZF47511.1 Feature: domain Description: CAD1 Location: 2468651-2469665 bp Feature: domain Description: CAD1 Location: 2468651 -2469665 bp Feature: gene Location: 2470157-2471524 bp Ori: AZF47512.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2470490-2471102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2470490-2471 1 02 bp Feature: domain Description: GIIM Note: maturase Location: 2471162-2471366 bp Feature: domain Description: GIIM Note: maturase Location: 2471 1 62-2471 366 bp Feature: gene Location: 2471675-2471800 bp Feature: gene Location: 2472258-2472830 bp Ori: AZF47514.1 Feature: domain Description: PAS Location: 2472336-2472576 bp Feature: domain Description: PAS Location: 2472336-2472576 bp Feature: domain Description: HTH_LUXR Location: 2472651-2472810 bp Feature: domain Description: HTH_LUXR Location: 2472651 -247281 0 bp Feature: gene Location: 3045767-3046462 bp Ori: AZF48002.1 Feature: domain Description: AzlC Location: 3045791-3046445 bp Feature: domain Description: AzlC Location: 3045791 -3046445 bp Feature: gene Location: 3046534-3046749 bp Feature: gene Location: 3047522-3048889 bp Ori: AZF48004.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3047855-3048467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3047855-3048467 bp Feature: domain Description: GIIM Note: maturase Location: 3048527-3048731 bp Feature: domain Description: GIIM Note: maturase Location: 3048527-3048731 bp Feature: gene Location: 3049305-3049505 bp Ori: AZF48005.1 Feature: domain Description: HTH_ARSR Location: 3049332-3049464 bp Feature: domain Description: HTH_ARSR Location: 3049332-3049464 bp Feature: gene Location: 3049525-3050808 bp Ori: AZF48006.1 Feature: domain Description: PRK15445 Location: 3049534-3050803 bp Feature: domain Description: PRK1 5445 Location: 3049534-3050803 bp Feature: gene Location: 4547232-4547606 bp Ori: AZF49392.1 Feature: domain Description: OM_YfiO Location: 4547451-4547553 bp Feature: domain Description: OM_YfiO Location: 4547451 -4547553 bp Feature: gene Location: 4547780-4549231 bp Ori: AZF49393.1 Feature: domain Description: PRK05826 Location: 4547789-4549184 bp Feature: domain Description: PRK05826 Location: 4547789-45491 84 bp Feature: gene Location: 4549702-4551069 bp Ori: AZF49394.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4550035-4550647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4550035-4550647 bp Feature: domain Description: GIIM Note: maturase Location: 4550707-4550911 bp Feature: domain Description: GIIM Note: maturase Location: 4550707-455091 1 bp Feature: gene Location: 4551766-4552698 bp Ori: AZF49395.1 Feature: domain Description: PRK05713 Location: 4551769-4552693 bp Feature: domain Description: PRK0571 3 Location: 4551 769-4552693 bp Feature: gene Location: 4552915-4554438 bp Ori: AZF49396.1 Feature: domain Description: TtdA Location: 4552918-4553806 bp Feature: domain Description: TtdA Location: 455291 8-4553806 bp Feature: domain Description: FumA Location: 4553863-4554409 bp Feature: domain Description: FumA Location: 4553863-4554409 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pbenz_hydroxyl (TIGR02360), MFS_Azr1_MDR_like (cd17502), RVT-GII, GIIM (pfam08388), sCache_2 (pfam17200), PBP2_PheC (cd01069), SgaA_N_like (cd07247), CAD1 (cd05283), PAS (smart00091), HTH_LUXR (smart00421)
AzlC (pfam03591), HTH_ARSR (smart00418), PRK15445 (arsenical efflux pump membrane protein ArsB), OM_YfiO (TIGR03302), PRK05826 (pyruvate kinase; Provisional), PRK05713 (iron-sulfur-binding ferredoxin reductase), TtdA (COG1951), FumA (COG1838)