myRT

myRT report for GCA_003855335.1_ASM385533v1

Download annotations/find similar RTs

Seq: CP034054.1 Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence (299188 bp)
Overview 1 RT 1: 16283-20509 bp Neighborhood of RT #1 [16283, 20509] InsA RVT-GII INT_Cre_C Feature: gene Location: 16283-16980 bp Feature: domain Description: InsA Location: 16289-16556 bp Feature: domain Description: InsA Location: 1 6289-1 6556 bp Feature: gene Location: 17169-17420 bp Feature: gene Location: 17420-18904 bp Ori: AZG62231.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17822-18512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7822-1 851 2 bp Feature: gene Location: 18990-20126 bp Ori: AZG62232.1 Feature: domain Description: INT_Cre_C Location: 19413-20067 bp Feature: domain Description: INT_Cre_C Location: 1 941 3-20067 bp Feature: gene Location: 20192-20509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsA (COG3677), RVT-GII, INT_Cre_C (cd00799)

Seq: CP034053.1 Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 chromosome, complete genome (5284191 bp)
Overview 1 RT 1: 769130-776478 bp 2 RT 2: 3140708-3143539 bp Neighborhood of RT #1 [769130, 776528] FimC FimD RVT-UG4 Integrase_1 PRK09692 Neighborhood of RT #2 [3140708, 3143550] PRK10276 RVT-GII DinI Feature: gene Location: 769130-769894 bp Ori: AZG57990.1 Feature: domain Description: FimC Location: 769175-769877 bp Feature: domain Description: FimC Location: 769175-769877 bp Feature: gene Location: 769941-772535 bp Ori: AZG57991.1 Feature: domain Description: FimD Location: 769983-772524 bp Feature: domain Description: FimD Location: 769983-772 52 4 bp Feature: gene Location: 772532-774613 bp Ori: AZG57992.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 772943-773387 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 772 943-773387 bp Feature: gene Location: 774655-775110 bp Ori: AZG57993.1 Feature: domain Description: Integrase_1 Location: 774658-774892 bp Feature: domain Description: Integrase_1 Location: 774658-774892 bp Feature: gene Location: 775290-776528 bp Feature: domain Description: PRK09692 Location: 775296-776478 bp Feature: domain Description: PRK09692 Location: 7752 96-776478 bp Feature: gene Location: 3140708-3141127 bp Ori: AZG60104.1 Feature: domain Description: PRK10276 Location: 3140711-3141122 bp Feature: domain Description: PRK102 76 Location: 3140711-314112 2 bp Feature: gene Location: 3141105-3141290 bp Feature: gene Location: 3141206-3142690 bp Ori: AZG60106.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3141608-3142298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3141608-3142 2 98 bp Feature: gene Location: 3142690-3142941 bp Feature: gene Location: 3143308-3143550 bp Ori: AZG60108.1 Feature: domain Description: DinI Location: 3143359-3143539 bp Feature: domain Description: DinI Location: 3143359-3143539 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), PRK09692 (Integrase; provisional), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DinI (pfam06183)