myRT

myRT report for GCA_003856475.1_ASM385647v1

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Seq: CP034125.1 Klebsiella pneumoniae strain BJCFK909 plasmid p2b2, complete sequence (109179 bp)
Overview 1 RT 1: 18828-23049 bp 2 RT 2: 74358-78440 bp Neighborhood of RT #1 [18828, 23049] DUF1380 RVT_N RVT-GII GIIM HNHc Neighborhood of RT #2 [74358, 78577] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 18828-19250 bp Ori: AZH23494.1 Feature: domain Description: DUF1380 Location: 18831-19125 bp Feature: domain Description: DUF1 380 Location: 1 8831 -1 91 25 bp Feature: gene Location: 19247-19438 bp Feature: gene Location: 19752-21419 bp Ori: AZH23496.1 Gene: ltrA Feature: domain Description: RVT_N Location: 19800-20037 bp Feature: domain Description: RVT_N Location: 1 9800-20037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20088-20730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20088-20730 bp Feature: domain Description: GIIM Note: maturase Location: 20781-21015 bp Feature: domain Description: GIIM Note: maturase Location: 20781 -21 01 5 bp Feature: domain Description: HNHc Note: nucleases Location: 21225-21384 bp Feature: domain Description: HNHc Note: nucleases Location: 21 225-21 384 bp Feature: gene Location: 22299-22556 bp Feature: gene Location: 22819-23049 bp Feature: gene Location: 74358-74789 bp Ori: AZH23550.1 Feature: domain Description: PRK10276 Location: 74409-74772 bp Feature: domain Description: PRK1 0276 Location: 74409-74772 bp Feature: gene Location: 74948-75199 bp Feature: gene Location: 75199-76683 bp Ori: AZH23605.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75601-76291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75601 -76291 bp Feature: gene Location: 76932-77903 bp Ori: AZH23552.1 Feature: domain Description: StbA Location: 76935-77880 bp Feature: domain Description: StbA Location: 76935-77880 bp Feature: gene Location: 77906-78577 bp Ori: AZH23553.1 Feature: domain Description: Plasmid_stab_B Location: 77921-78128 bp Feature: domain Description: Plasmid_stab_B Location: 77921 -781 28 bp Feature: domain Description: Plasmid_stab_B Location: 78233-78440 bp Feature: domain Description: Plasmid_stab_B Location: 78233-78440 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: CP034124.1 Klebsiella pneumoniae strain BJCFK909 plasmid p1b1, complete sequence (200216 bp)
Overview 1 RT 1: 183844-187706 bp Neighborhood of RT #1 [183844, 187706] HHA RVT-GII INT_Cre_C Feature: gene Location: 183844-184098 bp Ori: AZH23443.1 Feature: domain Description: HHA Location: 183895-184078 bp Feature: domain Description: HHA Location: 183895-184078 bp Feature: gene Location: 184365-184616 bp Feature: gene Location: 184616-186100 bp Ori: AZH23473.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 185018-185708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 185018-185708 bp Feature: gene Location: 186187-187323 bp Ori: AZH23445.1 Feature: domain Description: INT_Cre_C Location: 186610-187264 bp Feature: domain Description: INT_Cre_C Location: 186610-1872 64 bp Feature: gene Location: 187389-187706 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799)

Seq: CP034126.1 Klebsiella pneumoniae strain BJCFK909 plasmid p3s1, complete sequence (85665 bp)
Overview 1 RT 1: 11562-15262 bp Neighborhood of RT #1 [11562, 15360] umuC PRK10276 RVT-GII DUF2913 Feature: gene Location: 11562-12341 bp Ori: AZH23629.1 Feature: domain Description: umuC Location: 11565-12327 bp Feature: domain Description: umuC Location: 11565-123 27 bp Feature: gene Location: 12341-12766 bp Ori: AZH23630.1 Feature: domain Description: PRK10276 Location: 12392-12752 bp Feature: domain Description: PRK10276 Location: 123 92-12752 bp Feature: gene Location: 12844-14328 bp Ori: AZH23703.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13246-13936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 246-13 93 6 bp Feature: gene Location: 14328-14579 bp Feature: gene Location: 14746-15360 bp Ori: AZH23632.1 Feature: domain Description: DUF2913 Location: 14776-15262 bp Feature: domain Description: DUF2913 Location: 14776-15262 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DUF2913 (pfam11140)

Seq: CP034123.1 Klebsiella pneumoniae strain BJCFK909 chromosome, complete genome (5471151 bp)
Overview 1 RT 1: 1216302-1221187 bp 2 RT 2: 1836264-1841136 bp 3 RT 3: 1856877-1863139 bp 4 RT 4: 3110323-3114461 bp 5 RT 5: 3261614-3265713 bp 6 RT 6: 3334446-3338708 bp 7 RT 7: 3700907-3705745 bp Neighborhood of RT #1 [1216302, 1221192] Phage_GPA RVT-GII DinI Neighborhood of RT #2 [1836264, 1841150] dacD RVT-GII PRK10016 YccC Neighborhood of RT #3 [1856877, 1863139] STKc_PknB_like RVT-Retrons AAA_15 Neighborhood of RT #4 [3110323, 3114461] umuC PRK10276 RVT-GII Neighborhood of RT #5 [3261614, 3265724] umuC PRK10276 RVT-GII DinI Neighborhood of RT #6 [3334446, 3338746] PRK10597 RVT-GII PRK05318 Neighborhood of RT #7 [3700907, 3705795] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int Feature: gene Location: 1216302-1218686 bp Ori: AZH19178.1 Feature: domain Description: Phage_GPA Location: 1216866-1217832 bp Feature: domain Description: Phage_GPA Location: 1216866-1217832 bp Feature: gene Location: 1218916-1219167 bp Feature: gene Location: 1219167-1220651 bp Ori: AZH23090.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1219569-1220259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1219569-1220259 bp Feature: gene Location: 1220759-1220947 bp Feature: gene Location: 1220959-1221192 bp Ori: AZH19181.1 Feature: domain Description: DinI Location: 1221004-1221187 bp Feature: domain Description: DinI Location: 1221004 -1221187 bp Feature: gene Location: 1836264-1837433 bp Ori: AZH19726.1 Gene: dacD Feature: domain Description: dacD Location: 1836273-1837428 bp Feature: domain Description: dacD Location: 1836273-18374 28 bp Feature: gene Location: 1837703-1837954 bp Feature: gene Location: 1837954-1839438 bp Ori: AZH23114.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1838356-1839046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1838356-183904 6 bp Feature: gene Location: 1839520-1839993 bp Ori: AZH19728.1 Gene: sbmC Feature: domain Description: PRK10016 Location: 1839523-1839982 bp Feature: domain Description: PRK10016 Location: 1839523-1839982 bp Feature: gene Location: 1840092-1841150 bp Ori: AZH19729.1 Feature: domain Description: YccC Location: 1840098-1841136 bp Feature: domain Description: YccC Location: 184 0098-184 1136 bp Feature: gene Location: 1856877-1857980 bp Ori: AZH19748.1 Feature: domain Description: STKc_PknB_like Location: 1857009-1857450 bp Feature: domain Description: STKc_PknB_like Location: 1857009-18574 50 bp Feature: gene Location: 1858050-1858292 bp Feature: gene Location: 1858539-1859639 bp Ori: AZH19749.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1858722-1859250 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1858722-1859250 bp Feature: gene Location: 1859754-1862000 bp Ori: AZH19750.1 Feature: domain Description: AAA_15 Location: 1859757-1860765 bp Feature: domain Description: AAA_15 Location: 1859757-1860765 bp Feature: gene Location: 1862909-1863139 bp Feature: gene Location: 3110323-3111588 bp Ori: AZH20909.1 Gene: umuC Feature: domain Description: umuC Location: 3110326-3111586 bp Feature: domain Description: umuC Location: 3110326-3111586 bp Feature: gene Location: 3111590-3112009 bp Ori: AZH20910.1 Feature: domain Description: PRK10276 Location: 3111593-3112004 bp Feature: domain Description: PRK10276 Location: 3111593-3112004 bp Feature: gene Location: 3112089-3113573 bp Ori: AZH23182.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3112491-3113181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31124 91-3113181 bp Feature: gene Location: 3113573-3113824 bp Feature: gene Location: 3114372-3114461 bp Feature: gene Location: 3261614-3262879 bp Ori: AZH21058.1 Gene: umuC Feature: domain Description: umuC Location: 3261617-3262877 bp Feature: domain Description: umuC Location: 3261617-3262877 bp Feature: gene Location: 3262882-3263301 bp Ori: AZH21059.1 Feature: domain Description: PRK10276 Location: 3262885-3263296 bp Feature: domain Description: PRK10276 Location: 3262885-3263296 bp Feature: gene Location: 3263380-3264864 bp Ori: AZH23189.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3263782-3264472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3263782-3264 4 72 bp Feature: gene Location: 3264864-3265115 bp Feature: gene Location: 3265482-3265724 bp Ori: AZH21061.1 Feature: domain Description: DinI Location: 3265533-3265713 bp Feature: domain Description: DinI Location: 3265533-3265713 bp Feature: gene Location: 3334446-3334736 bp Feature: gene Location: 3334748-3334981 bp Ori: AZH21132.1 Feature: domain Description: PRK10597 Location: 3334751-3334976 bp Feature: domain Description: PRK10597 Location: 3334 751-3334 976 bp Feature: gene Location: 3335060-3336544 bp Ori: AZH23194.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3335462-3336152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33354 62-3336152 bp Feature: gene Location: 3336544-3336795 bp Feature: gene Location: 3337385-3338746 bp Ori: AZH21134.1 Feature: domain Description: PRK05318 Location: 3337409-3338708 bp Feature: domain Description: PRK05318 Location: 33374 09-3338708 bp Feature: gene Location: 3700907-3701785 bp Ori: AZH23217.1 Feature: domain Description: Phage_CI_repr Location: 3700934-3701117 bp Feature: domain Description: Phage_CI_repr Location: 3700934 -3701117 bp Feature: domain Description: Phage_CI_repr Location: 3701246-3701438 bp Feature: domain Description: Phage_CI_repr Location: 370124 6-37014 38 bp Feature: domain Description: Phage_CI_C Location: 3701465-3701759 bp Feature: domain Description: Phage_CI_C Location: 37014 65-3701759 bp Feature: gene Location: 3701797-3702741 bp Feature: gene Location: 3702840-3704324 bp Ori: AZH23218.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3703242-3703932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 370324 2-3703932 bp Feature: gene Location: 3704324-3704575 bp Feature: gene Location: 3704743-3705795 bp Ori: AZH21480.1 Feature: domain Description: int Location: 3704746-3705745 bp Feature: domain Description: int Location: 3704 74 6-370574 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_GPA (pfam05840), RVT-GII, DinI (pfam06183), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), STKc_PknB_like (cd14014), RVT-Retrons, AAA_15 (pfam13175), umuC (PRK03609)
PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PRK10597 (DNA damage-inducible protein I; Provisional), PRK05318 (deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601)