myRT

myRT report for GCA_003856675.1_ASM385667v1

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Seq: CP023821.1 Escherichia coli strain 7/2 plasmid p7_2.1, complete sequence (113737 bp)
Overview 1 RT 1: 82658-86084 bp Neighborhood of RT #1 [82658, 86484] InsE PHA02517 RVT-GII GIIM InsE Feature: gene Location: 82658-83062 bp Ori: AZH37090.1 Feature: domain Description: InsE Location: 82688-83024 bp Feature: domain Description: InsE Location: 82688-83024 bp Feature: gene Location: 83091-83474 bp Feature: domain Description: PHA02517 Location: 83097-83430 bp Feature: domain Description: PHA0251 7 Location: 83097-83430 bp Feature: gene Location: 83564-85087 bp Ori: AZH37091.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83837-84569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83837-84569 bp Feature: domain Description: GIIM Note: maturase Location: 84644-84842 bp Feature: domain Description: GIIM Note: maturase Location: 84644-84842 bp Feature: gene Location: 85381-85752 bp Feature: gene Location: 85745-86484 bp Feature: domain Description: InsE Location: 85748-86084 bp Feature: domain Description: InsE Location: 85748-86084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: CP023820.1 Escherichia coli strain 7/2 chromosome, complete genome (5099240 bp)
Overview 1 RT 1: 294479-300722 bp 2 RT 2: 1003895-1008473 bp 3 RT 3: 4743051-4747342 bp 4 RT 4: 4772837-4776394 bp Neighborhood of RT #1 [294479, 300859] RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Neighborhood of RT #2 [1003895, 1008481] HTH_XRE RVT-Retrons FRG Q Neighborhood of RT #3 [4743051, 4747342] YesM RVT-GII GIIM RVT-GII Neighborhood of RT #4 [4772837, 4776419] PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 294479-294637 bp Feature: gene Location: 294828-295298 bp Feature: gene Location: 295645-298854 bp Ori: AZH32355.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 296173-296662 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 96173-2 96662 bp Feature: domain Description: nitrilase Location: 298168-298765 bp Feature: domain Description: nitrilase Location: 2 98168-2 98765 bp Feature: gene Location: 299149-299952 bp Ori: AZH32356.1 Feature: domain Description: AbiEi_3_N Location: 299182-299443 bp Feature: domain Description: AbiEi_3_N Location: 2 99182 -2 99443 bp Feature: domain Description: AbiEi_3 Location: 299455-299911 bp Feature: domain Description: AbiEi_3 Location: 2 99455-2 99911 bp Feature: gene Location: 299939-300859 bp Ori: AZH32357.1 Feature: domain Description: AbiEii Location: 299981-300722 bp Feature: domain Description: AbiEii Location: 2 99981-30072 2 bp Feature: gene Location: 1003895-1004188 bp Feature: gene Location: 1004225-1004545 bp Ori: AZH32974.1 Feature: domain Description: HTH_XRE Location: 1004240-1004399 bp Feature: domain Description: HTH_XRE Location: 10042 40-1004399 bp Feature: gene Location: 1004511-1005461 bp Ori: AZH32975.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1004691-1005234 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1004691-10052 34 bp Feature: gene Location: 1005570-1006934 bp Ori: AZH32976.1 Feature: domain Description: FRG Location: 1006137-1006422 bp Feature: domain Description: FRG Location: 1006137-100642 2 bp Feature: gene Location: 1007447-1008481 bp Ori: AZH32977.1 Feature: domain Description: Q Location: 1007450-1008473 bp Feature: domain Description: Q Location: 1007450-1008473 bp Feature: gene Location: 4743051-4744280 bp Ori: AZH36454.1 Feature: domain Description: YesM Location: 4743531-4744272 bp Feature: domain Description: YesM Location: 4743531-47442 72 bp Feature: gene Location: 4744353-4744541 bp Feature: gene Location: 4744863-4745384 bp Ori: AZH36456.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4744869-4745151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4744869-4745151 bp Feature: domain Description: GIIM Note: maturase Location: 4745199-4745379 bp Feature: domain Description: GIIM Note: maturase Location: 4745199-4745379 bp Feature: gene Location: 4745412-4745951 bp Ori: AZH36457.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4745742-4745820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4745742 -474582 0 bp Feature: gene Location: 4746176-4746463 bp Feature: gene Location: 4746437-4747342 bp Feature: gene Location: 4772837-4773220 bp Feature: domain Description: PHA02517 Location: 4772867-4773221 bp Feature: domain Description: PHA02 517 Location: 4772 867-47732 2 1 bp Feature: gene Location: 4773213-4773584 bp Feature: gene Location: 4773878-4775401 bp Ori: AZH36485.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4774151-4774883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4774151-4774883 bp Feature: domain Description: GIIM Note: maturase Location: 4774958-4775156 bp Feature: domain Description: GIIM Note: maturase Location: 4774958-4775156 bp Feature: gene Location: 4775491-4775964 bp Feature: domain Description: PHA02517 Location: 4775497-4775962 bp Feature: domain Description: PHA02 517 Location: 4775497-4775962 bp Feature: gene Location: 4776100-4776419 bp Feature: domain Description: InsE Location: 4776109-4776394 bp Feature: domain Description: InsE Location: 4776109-4776394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843), HTH_XRE (smart00530), RVT-Retrons, FRG (smart00901), Q (PHA02536), YesM (COG2972)
RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)