myRT

myRT report for GCA_003856695.1_ASM385669v1

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Seq: CP023845.1 Escherichia coli strain 4/1-1 plasmid p4_1_1.1, complete sequence (181324 bp)
Overview 1 RT 1: 66729-70388 bp Neighborhood of RT #1 [66729, 70450] InsE RVT-GII GIIM DDE_Tnp_Tn3 Feature: gene Location: 66729-67450 bp Feature: domain Description: InsE Location: 66804-67038 bp Feature: domain Description: InsE Location: 66804-67038 bp Feature: gene Location: 67443-67814 bp Feature: gene Location: 68108-69631 bp Ori: AZH57691.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68381-69113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68381 -691 1 3 bp Feature: domain Description: GIIM Note: maturase Location: 69188-69386 bp Feature: domain Description: GIIM Note: maturase Location: 691 88-69386 bp Feature: gene Location: 69721-70195 bp Feature: gene Location: 70217-70450 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 70232-70388 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 70232-70388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), DDE_Tnp_Tn3 (pfam01526)

Seq: CP023844.1 Escherichia coli strain 4/1-1 chromosome, complete genome (5144480 bp)
Overview 1 RT 1: 1345995-1350893 bp 2 RT 2: 5108968-5114023 bp Neighborhood of RT #1 [1345995, 1350893] RVT-Retrons Neighborhood of RT #2 [5108968, 5114025] Caudo_TAP SR_ResInv SR_ResInv RVT-Retrons TIR_2 PRK10597 prfC Feature: gene Location: 1345995-1346225 bp Feature: gene Location: 1346440-1346679 bp Feature: gene Location: 1347250-1349007 bp Ori: AZH53915.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1347394-1348012 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1347394-1348012 bp Feature: gene Location: 1349254-1350381 bp Feature: gene Location: 1350378-1350893 bp Feature: gene Location: 5108968-5109552 bp Ori: AZH57403.1 Feature: domain Description: Caudo_TAP Location: 5109184-5109541 bp Feature: domain Description: Caudo_TAP Location: 5109184-5109541 bp Feature: gene Location: 5109610-5109813 bp Feature: domain Description: SR_ResInv Location: 5109622-5109733 bp Feature: domain Description: SR_ResInv Location: 510962 2 -5109733 bp Feature: domain Description: SR_ResInv Location: 5109736-5109799 bp Feature: domain Description: SR_ResInv Location: 5109736-5109799 bp Feature: gene Location: 5109997-5111601 bp Ori: AZH57404.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5110288-5110879 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 51102 88-5110879 bp Feature: domain Description: TIR_2 Location: 5111206-5111539 bp Feature: domain Description: TIR_2 Location: 51112 06-5111539 bp Feature: gene Location: 5111959-5112219 bp Ori: AZH57405.1 Feature: domain Description: PRK10597 Location: 5111962-5112202 bp Feature: domain Description: PRK10597 Location: 5111962 -5112 2 02 bp Feature: gene Location: 5112439-5114025 bp Ori: AZH57406.1 Gene: prfC Feature: domain Description: prfC Location: 5112457-5114023 bp Feature: domain Description: prfC Location: 5112 457-511402 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Caudo_TAP (pfam02413), SR_ResInv (cd03768), TIR_2 (pfam13676), PRK10597 (DNA damage-inducible protein I; Provisional), prfC (TIGR00503)