myRT

myRT report for GCA_003856995.1_ASM385699v1

Download annotations/find similar RTs

Seq: CP022734.1 Escherichia coli strain SA186 plasmid pSA186_5, complete sequence (106936 bp)
Overview 1 RT 1: 72106-76379 bp Neighborhood of RT #1 [72106, 76384] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 72106-72704 bp Feature: gene Location: 72703-72909 bp Feature: gene Location: 73558-75459 bp Ori: AZH90270.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73825-74656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73825-74656 bp Feature: domain Description: Intron_maturas2 Location: 74770-75028 bp Feature: domain Description: Intron_maturas2 Location: 74770-75028 bp Feature: domain Description: HNHc Note: nucleases Location: 75202-75364 bp Feature: domain Description: HNHc Note: nucleases Location: 75202-75364 bp Feature: gene Location: 75608-76093 bp Ori: AZH90271.1 Feature: domain Description: PRK13732 Location: 75611-76091 bp Feature: domain Description: PRK1 3732 Location: 7561 1 -76091 bp Feature: gene Location: 76151-76384 bp Ori: AZH90272.1 Feature: domain Description: DUF905 Location: 76181-76379 bp Feature: domain Description: DUF905 Location: 761 81 -76379 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)

Seq: CP022732.1 Escherichia coli strain SA186 plasmid pSA186_3, complete sequence (113162 bp)
Overview 1 RT 1: 83836-87628 bp Neighborhood of RT #1 [83836, 87633] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 83836-84072 bp Feature: gene Location: 84014-84226 bp Feature: gene Location: 84789-86690 bp Ori: AZH90032.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85056-85887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85056-85887 bp Feature: domain Description: Intron_maturas2 Location: 86001-86259 bp Feature: domain Description: Intron_maturas2 Location: 86001-862 59 bp Feature: domain Description: HNHc Note: nucleases Location: 86433-86595 bp Feature: domain Description: HNHc Note: nucleases Location: 86433-86595 bp Feature: gene Location: 86840-87337 bp Ori: AZH90033.1 Feature: domain Description: PRK13732 Location: 86843-87335 bp Feature: domain Description: PRK13732 Location: 86843-87335 bp Feature: gene Location: 87400-87633 bp Ori: AZH90034.1 Feature: domain Description: DUF905 Location: 87430-87628 bp Feature: domain Description: DUF905 Location: 87430-8762 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)

Seq: CP022730.1 Escherichia coli strain SA186 chromosome, complete genome (4828837 bp)
Overview 1 RT 1: 4591047-4595945 bp 2 RT 2: 4613837-4617564 bp Neighborhood of RT #1 [4591047, 4595945] RVT-Retrons Neighborhood of RT #2 [4613837, 4617564] PRK09183 PHA02517 RVT-GII GIIM Feature: gene Location: 4591047-4591277 bp Feature: gene Location: 4591492-4591731 bp Feature: gene Location: 4592302-4594059 bp Ori: AZH89394.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4592446-4593064 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4592446-4593 064 bp Feature: gene Location: 4594306-4595433 bp Feature: gene Location: 4595430-4595945 bp Feature: gene Location: 4613837-4614214 bp Feature: domain Description: PRK09183 Location: 4613861-4614212 bp Feature: domain Description: PRK09183 Location: 4613 861-4614212 bp Feature: gene Location: 4614837-4615295 bp Feature: domain Description: PHA02517 Location: 4614840-4615287 bp Feature: domain Description: PHA02517 Location: 4614840-4615287 bp Feature: gene Location: 4615376-4616899 bp Ori: AZH89415.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4615649-4616381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4615649-46163 81 bp Feature: domain Description: GIIM Note: maturase Location: 4616456-4616654 bp Feature: domain Description: GIIM Note: maturase Location: 4616456-4616654 bp Feature: gene Location: 4616970-4617278 bp Feature: gene Location: 4617193-4617564 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PRK09183 (transposase/IS protein; Provisional), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: CP022731.1 Escherichia coli strain SA186 plasmid pSA186_2, complete sequence (198748 bp)
Overview 1 RT 1: 68433-71352 bp Neighborhood of RT #1 [68433, 71352] PHA02517 RVT-GII GIIM Feature: gene Location: 68433-68591 bp Feature: gene Location: 68595-69083 bp Feature: domain Description: PHA02517 Location: 68598-69048 bp Feature: domain Description: PHA02517 Location: 68598-6904 8 bp Feature: gene Location: 69164-70687 bp Ori: AZH89838.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69437-70169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 694 37-70169 bp Feature: domain Description: GIIM Note: maturase Location: 70244-70442 bp Feature: domain Description: GIIM Note: maturase Location: 7024 4 -704 4 2 bp Feature: gene Location: 70758-71066 bp Feature: gene Location: 70981-71352 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)