myRT

myRT report for GCA_003868675.1_ASM386867v1

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Seq: CP032146.1 Bacillus amyloliquefaciens strain YP6 chromosome, complete genome (4009619 bp)
Overview 1 RT 1: 2229591-2240451 bp 2 RT 2: 2251048-2255179 bp Neighborhood of RT #1 [2229591, 2240462] tape_meas_TP901 MltE RVT-GII Intron_maturas2 HNHc NlpD SMC_prok_B SMC_prok_B YomH Neighborhood of RT #2 [2251048, 2255193] PRK03103 RVT-GII Intron_maturas2 HNHc PolY_Pol_V_umuC YolD Feature: gene Location: 2229591-2230217 bp Feature: gene Location: 2230281-2234693 bp Ori: QBG56668.1 Feature: domain Description: tape_meas_TP901 Location: 2231328-2232360 bp Feature: domain Description: tape_meas_TP901 Location: 2231 328-2232360 bp Feature: domain Description: MltE Location: 2234256-2234691 bp Feature: domain Description: MltE Location: 2234256-2234691 bp Feature: gene Location: 2235240-2237063 bp Ori: QBG56669.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2235504-2236335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2235504-2236335 bp Feature: domain Description: Intron_maturas2 Location: 2236446-2236710 bp Feature: domain Description: Intron_maturas2 Location: 2236446-223671 0 bp Feature: domain Description: HNHc Note: nucleases Location: 2236863-2237034 bp Feature: domain Description: HNHc Note: nucleases Location: 2236863-2237034 bp Feature: gene Location: 2237650-2239656 bp Ori: QBG56670.1 Feature: domain Description: NlpD Location: 2237662-2237809 bp Feature: domain Description: NlpD Location: 2237662-2237809 bp Feature: domain Description: SMC_prok_B Location: 2237809-2238595 bp Feature: domain Description: SMC_prok_B Location: 2237809-2238595 bp Feature: domain Description: SMC_prok_B Location: 2238619-2239159 bp Feature: domain Description: SMC_prok_B Location: 223861 9-22391 59 bp Feature: gene Location: 2239701-2240462 bp Ori: QBG56671.1 Feature: domain Description: YomH Location: 2239719-2240451 bp Feature: domain Description: YomH Location: 223971 9-2240451 bp Feature: gene Location: 2251048-2251167 bp Feature: gene Location: 2251215-2251829 bp Ori: QBG56683.1 Gene: umuC Feature: domain Description: PRK03103 Location: 2251278-2251821 bp Feature: domain Description: PRK031 03 Location: 2251 278-2251 821 bp Feature: gene Location: 2251870-2253681 bp Ori: QBG56684.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2252134-2252965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22521 34-2252965 bp Feature: domain Description: Intron_maturas2 Location: 2253040-2253448 bp Feature: domain Description: Intron_maturas2 Location: 2253040-2253448 bp Feature: domain Description: HNHc Note: nucleases Location: 2253493-2253655 bp Feature: domain Description: HNHc Note: nucleases Location: 2253493-2253655 bp Feature: gene Location: 2254233-2254943 bp Ori: QBG56685.1 Gene: uvrX Feature: domain Description: PolY_Pol_V_umuC Location: 2254272-2254938 bp Feature: domain Description: PolY_Pol_V_umuC Location: 2254272-2254938 bp Feature: gene Location: 2254936-2255193 bp Ori: QBG56686.1 Feature: domain Description: YolD Location: 2254951-2255179 bp Feature: domain Description: YolD Location: 2254951 -22551 79 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT tape_meas_TP901 (TIGR01760), MltE (COG0741), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), NlpD (COG0739), SMC_prok_B (TIGR02168), YomH (COG4722), PRK03103 (DNA polymerase IV; Reviewed), PolY_Pol_V_umuC (cd01700)
YolD (pfam08863)