myRT

myRT report for GCA_003925875.1_ASM392587v1

Download annotations/find similar RTs

Seq: AP019309.1 Erysipelotrichaceae bacterium SG0102 DNA, complete genome (3212924 bp)
Overview 1 RT 1: 473088-480877 bp 2 RT 2: 1781739-1785197 bp 3 RT 3: 1989524-1994225 bp Neighborhood of RT #1 [473088, 480948] VOC_Bs_YwkD_like COG5421 RVT-GII Phage_int_SAM_1 INT_RitA_C_like INT_RitB_C_like Neighborhood of RT #2 [1781739, 1785625] PulG GIIM RVT-GII N_methyl Neighborhood of RT #3 [1989524, 1994225] RHH_5 RVT-GII GIIM DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 473088-473471 bp Ori: BBH25520.1 Feature: domain Description: VOC_Bs_YwkD_like Location: 473100-473469 bp Feature: domain Description: VOC_Bs_YwkD_like Location: 4731 00-473469 bp Feature: gene Location: 474131-475819 bp Ori: BBH25521.1 Feature: domain Description: COG5421 Location: 474704-475625 bp Feature: domain Description: COG5421 Location: 474704-475625 bp Feature: gene Location: 477048-478472 bp Ori: BBH25522.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 477276-477900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 477276-477900 bp Feature: gene Location: 478728-479978 bp Ori: BBH25523.1 Feature: domain Description: Phage_int_SAM_1 Location: 479115-479316 bp Feature: domain Description: Phage_int_SAM_1 Location: 4791 1 5-47931 6 bp Feature: domain Description: INT_RitA_C_like Location: 479403-479940 bp Feature: domain Description: INT_RitA_C_like Location: 479403-479940 bp Feature: gene Location: 479971-480948 bp Ori: BBH25524.1 Feature: domain Description: INT_RitB_C_like Location: 480307-480877 bp Feature: domain Description: INT_RitB_C_like Location: 480307-480877 bp Feature: gene Location: 1781739-1782257 bp Ori: BBH26730.1 Feature: domain Description: PulG Location: 1781745-1782090 bp Feature: domain Description: PulG Location: 1 781 745-1 782090 bp Feature: gene Location: 1782322-1782702 bp Ori: BBH26731.1 Feature: domain Description: GIIM Note: maturase Location: 1782328-1782484 bp Feature: domain Description: GIIM Note: maturase Location: 1 782328-1 782484 bp Feature: gene Location: 1782994-1783629 bp Ori: BBH26732.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1783195-1783624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7831 95-1 783624 bp Feature: gene Location: 1784253-1785158 bp Feature: gene Location: 1785119-1785625 bp Ori: BBH26734.1 Feature: domain Description: N_methyl Location: 1785122-1785197 bp Feature: domain Description: N_methyl Location: 1 7851 22-1 7851 97 bp Feature: gene Location: 1989524-1989709 bp Ori: BBH26946.1 Feature: domain Description: RHH_5 Location: 1989548-1989632 bp Feature: domain Description: RHH_5 Location: 1 989548-1 989632 bp Feature: gene Location: 1989805-1990116 bp Feature: gene Location: 1990257-1991474 bp Ori: BBH26948.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1990365-1990986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 990365-1 990986 bp Feature: domain Description: GIIM Note: maturase Location: 1991040-1991250 bp Feature: domain Description: GIIM Note: maturase Location: 1 991 040-1 991 250 bp Feature: gene Location: 1991948-1993846 bp Ori: BBH26949.1 Feature: domain Description: DDE_Tnp_IS66 Location: 1992623-1993520 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 992623-1 993520 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1993541-1993664 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 993541 -1 993664 bp Feature: gene Location: 1993857-1994225 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VOC_Bs_YwkD_like (cd08352), COG5421 (Transposase ), RVT-GII, Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), INT_RitB_C_like (cd00797), PulG (pfam11773), GIIM (pfam08388), N_methyl (pfam07963), RHH_5 (pfam07878)
DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)