myRT

myRT report for GCA_003931835.1_ASM393183v1

Download annotations/find similar RTs

Seq: CP034249.1 Klebsiella pneumoniae strain KP18-29 chromosome, complete genome (5360130 bp)
Overview 1 RT 1: 1260334-1265219 bp 2 RT 2: 1827492-1832364 bp 3 RT 3: 3004105-3010153 bp 4 RT 4: 3192400-3195231 bp 5 RT 5: 3527835-3531273 bp 6 RT 6: 3971155-3975845 bp Neighborhood of RT #1 [1260334, 1265224] Phage_GPA RVT-GII DinI Neighborhood of RT #2 [1827492, 1832378] dacD RVT-GII PRK10016 YccC Neighborhood of RT #3 [3004105, 3010153] umuC PRK10276 RVT-GII RVT-GII Neighborhood of RT #4 [3192400, 3195242] PRK10276 RVT-GII DinI Neighborhood of RT #5 [3527835, 3531323] DinI RVT-GII int Neighborhood of RT #6 [3971155, 3975845] PRK10276 PRK10276 RVT-GII RVT-GII Feature: gene Location: 1260334-1262718 bp Ori: AZK54633.1 Feature: domain Description: Phage_GPA Location: 1260898-1261864 bp Feature: domain Description: Phage_GPA Location: 1 260898-1 261 864 bp Feature: gene Location: 1262948-1263199 bp Feature: gene Location: 1263199-1264683 bp Ori: AZK54635.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1263601-1264291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 263601 -1 264291 bp Feature: gene Location: 1264791-1264979 bp Feature: gene Location: 1264991-1265224 bp Ori: AZK54637.1 Feature: domain Description: DinI Location: 1265036-1265219 bp Feature: domain Description: DinI Location: 1 265036-1 26521 9 bp Feature: gene Location: 1827492-1828661 bp Ori: AZK55118.1 Gene: dacD Feature: domain Description: dacD Location: 1827501-1828656 bp Feature: domain Description: dacD Location: 1 827501 -1 828656 bp Feature: gene Location: 1828834-1829049 bp Feature: gene Location: 1829182-1830666 bp Ori: AZK55119.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1829584-1830274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 829584-1 830274 bp Feature: gene Location: 1830748-1831221 bp Ori: AZK55120.1 Gene: sbmC Feature: domain Description: PRK10016 Location: 1830751-1831210 bp Feature: domain Description: PRK1 001 6 Location: 1 830751 -1 831 21 0 bp Feature: gene Location: 1831320-1832378 bp Ori: AZK55121.1 Feature: domain Description: YccC Location: 1831326-1832364 bp Feature: domain Description: YccC Location: 1 831 326-1 832364 bp Feature: gene Location: 3004105-3005370 bp Ori: AZK56186.1 Gene: umuC Feature: domain Description: umuC Location: 3004108-3005368 bp Feature: domain Description: umuC Location: 30041 08-3005368 bp Feature: gene Location: 3005372-3005791 bp Ori: AZK56187.1 Feature: domain Description: PRK10276 Location: 3005375-3005786 bp Feature: domain Description: PRK1 0276 Location: 3005375-3005786 bp Feature: gene Location: 3005871-3007355 bp Ori: AZK56188.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3006273-3006963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3006273-3006963 bp Feature: gene Location: 3007355-3007606 bp Feature: gene Location: 3007781-3009265 bp Ori: AZK56190.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3008183-3008873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30081 83-3008873 bp Feature: gene Location: 3009265-3009516 bp Feature: gene Location: 3010064-3010153 bp Feature: gene Location: 3192400-3192819 bp Ori: AZK56379.1 Feature: domain Description: PRK10276 Location: 3192403-3192814 bp Feature: domain Description: PRK1 0276 Location: 31 92403-31 9281 4 bp Feature: gene Location: 3192797-3192982 bp Feature: gene Location: 3192898-3194382 bp Ori: AZK56381.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3193300-3193990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 93300-31 93990 bp Feature: gene Location: 3194382-3194633 bp Feature: gene Location: 3195000-3195242 bp Ori: AZK56383.1 Feature: domain Description: DinI Location: 3195051-3195231 bp Feature: domain Description: DinI Location: 31 95051 -31 95231 bp Feature: gene Location: 3527835-3528140 bp Ori: AZK56686.1 Feature: domain Description: DinI Location: 3527949-3528135 bp Feature: domain Description: DinI Location: 3527949-35281 35 bp Feature: gene Location: 3528079-3528267 bp Feature: gene Location: 3528368-3529852 bp Ori: AZK56687.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3528770-3529460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3528770-3529460 bp Feature: gene Location: 3529852-3530103 bp Feature: gene Location: 3530271-3531323 bp Ori: AZK56689.1 Feature: domain Description: int Location: 3530274-3531273 bp Feature: domain Description: int Location: 3530274-3531 273 bp Feature: gene Location: 3971155-3971472 bp Ori: AZK57065.1 Feature: domain Description: PRK10276 Location: 3971161-3971275 bp Feature: domain Description: PRK1 0276 Location: 3971 1 61 -3971 275 bp Feature: domain Description: PRK10276 Location: 3971302-3971371 bp Feature: domain Description: PRK1 0276 Location: 3971 302-3971 371 bp Feature: gene Location: 3971472-3971711 bp Feature: gene Location: 3971789-3973273 bp Ori: AZK57067.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3972191-3972881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39721 91 -3972881 bp Feature: gene Location: 3973273-3973524 bp Feature: gene Location: 3973699-3975183 bp Ori: AZK57069.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3974101-3974791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39741 01 -3974791 bp Feature: gene Location: 3975183-3975434 bp Feature: gene Location: 3975636-3975845 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_GPA (pfam05840), RVT-GII, DinI (pfam06183), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), int (PHA02601)