myRT

myRT report for GCA_003932035.1_ASM393203v1

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Seq: CP034276.1 Pectobacterium carotovorum strain 14A chromosome, complete genome (4997114 bp)
Overview 1 RT 1: 529964-534183 bp 2 RT 2: 1897544-1903374 bp 3 RT 3: 3812184-3817106 bp Neighborhood of RT #1 [529964, 534185] PRK13501 AAA_21 AAA_21 RVT-Retrons YoeB_toxin PRK11409 Neighborhood of RT #2 [1897544, 1904195] RVT-Retrons AAA_21 PRK13889 Neighborhood of RT #3 [3812184, 3817106] BamE RVT-AbiP2 PRK10328 Feature: gene Location: 529964-530818 bp Ori: AZK64914.1 Feature: domain Description: PRK13501 Location: 529988-530810 bp Feature: domain Description: PRK1 3501 Location: 529988-53081 0 bp Feature: gene Location: 531010-532338 bp Ori: AZK61240.1 Feature: domain Description: AAA_21 Location: 531109-531295 bp Feature: domain Description: AAA_21 Location: 531 1 09-531 295 bp Feature: domain Description: AAA_21 Location: 531505-531745 bp Feature: domain Description: AAA_21 Location: 531 505-531 745 bp Feature: gene Location: 532335-533306 bp Ori: AZK61241.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 532467-533034 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 532467-533034 bp Feature: gene Location: 533683-533937 bp Ori: AZK61242.1 Feature: domain Description: YoeB_toxin Location: 533698-533935 bp Feature: domain Description: YoeB_toxin Location: 533698-533935 bp Feature: gene Location: 533934-534185 bp Ori: AZK61243.1 Feature: domain Description: PRK11409 Location: 533937-534183 bp Feature: domain Description: PRK1 1 409 Location: 533937-5341 83 bp Feature: gene Location: 1897544-1897921 bp Feature: gene Location: 1898390-1898944 bp Feature: gene Location: 1899256-1900359 bp Ori: AZK62353.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1899400-1899952 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 899400-1 899952 bp Feature: gene Location: 1900524-1902641 bp Ori: AZK62354.1 Feature: domain Description: AAA_21 Location: 1900599-1901508 bp Feature: domain Description: AAA_21 Location: 1 900599-1 901 508 bp Feature: gene Location: 1902792-1904195 bp Ori: AZK62355.1 Feature: domain Description: PRK13889 Location: 1902795-1903374 bp Feature: domain Description: PRK1 3889 Location: 1 902795-1 903374 bp Feature: gene Location: 3812184-3812738 bp Feature: gene Location: 3813372-3813749 bp Ori: AZK63923.1 Feature: domain Description: BamE Location: 3813384-3813705 bp Feature: domain Description: BamE Location: 381 3384-381 3705 bp Feature: gene Location: 3814690-3816228 bp Ori: AZK63924.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3815119-3815578 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 381 51 1 9-381 5578 bp Feature: gene Location: 3816426-3816677 bp Ori: AZK63925.1 Feature: domain Description: PRK10328 Location: 3816459-3816657 bp Feature: domain Description: PRK1 0328 Location: 381 6459-381 6657 bp Feature: gene Location: 3816741-3817106 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13501 (HTH-type transcriptional activator RhaR), AAA_21 (pfam13304), RVT-Retrons, YoeB_toxin (pfam06769), PRK11409 (YoeB-YefM toxin-antitoxin system antitoxin YefM), PRK13889 (conjugal transfer relaxase TraA; Provisional), BamE (COG2913), RVT-AbiP2, PRK10328 (DNA-binding protein StpA)