myRT

myRT report for GCA_003934185.1_ASM393418v1

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Seq: CP034282.1 Klebsiella pneumoniae strain I72 plasmid p72_FIBkpn, complete sequence (193222 bp)
Overview 1 RT 1: 142115-145219 bp Neighborhood of RT #1 [142115, 145233] PRK10276 RVT-GII DUF1472 Feature: gene Location: 142115-142540 bp Ori: AZL46900.1 Feature: domain Description: PRK10276 Location: 142118-142526 bp Feature: domain Description: PRK1 0276 Location: 1 421 1 8-1 42526 bp Feature: gene Location: 142694-142945 bp Feature: gene Location: 142945-144453 bp Ori: AZL46902.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143347-144061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 43347-1 44061 bp Feature: gene Location: 144687-144917 bp Feature: gene Location: 145141-145233 bp Feature: domain Description: DUF1472 Location: 145153-145219 bp Feature: domain Description: DUF1 472 Location: 1 451 53-1 4521 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DUF1472 (pfam07339)

Seq: CP034281.1 Klebsiella pneumoniae strain I72, complete genome (5430436 bp)
Overview 1 RT 1: 1251696-1254344 bp 2 RT 2: 1284962-1287443 bp 3 RT 3: 3128113-3130943 bp 4 RT 4: 3520487-3532036 bp Neighborhood of RT #1 [1251696, 1254344] RVT-GII PRK10597 Neighborhood of RT #2 [1284962, 1287634] HTH_Hin_like RVT-GII PRK10276 Neighborhood of RT #3 [3128113, 3130954] PRK10276 RVT-GII DinI Neighborhood of RT #4 [3520487, 3532113] P Q RVT-Retrons DinI RVT-GII Phage_GPA dam Feature: gene Location: 1251696-1251878 bp Feature: gene Location: 1251943-1252194 bp Feature: gene Location: 1252194-1253678 bp Ori: AZL42787.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1252596-1253286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 52 596-12 532 86 bp Feature: gene Location: 1253757-1253990 bp Ori: AZL42788.1 Feature: domain Description: PRK10597 Location: 1253760-1253985 bp Feature: domain Description: PRK10597 Location: 12 53760-12 53985 bp Feature: gene Location: 1254096-1254344 bp Feature: gene Location: 1284962-1285090 bp Feature: domain Description: HTH_Hin_like Location: 1284965-1285043 bp Feature: domain Description: HTH_Hin_like Location: 12 84965-12 85043 bp Feature: gene Location: 1285260-1285511 bp Feature: gene Location: 1285511-1286995 bp Ori: AZL42825.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1285913-1286603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 85913-12 86603 bp Feature: gene Location: 1287072-1287311 bp Feature: gene Location: 1287314-1287634 bp Ori: AZL42827.1 Feature: domain Description: PRK10276 Location: 1287317-1287443 bp Feature: domain Description: PRK102 76 Location: 12 87317-12 87443 bp Feature: gene Location: 3128113-3128532 bp Ori: AZL44480.1 Feature: domain Description: PRK10276 Location: 3128116-3128527 bp Feature: domain Description: PRK102 76 Location: 312 8116-312 852 7 bp Feature: gene Location: 3128510-3128695 bp Feature: gene Location: 3128611-3130095 bp Ori: AZL44482.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3129013-3129703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 312 9013-312 9703 bp Feature: gene Location: 3130095-3130346 bp Feature: gene Location: 3130712-3130954 bp Ori: AZL44484.1 Feature: domain Description: DinI Location: 3130763-3130943 bp Feature: domain Description: DinI Location: 3130763-3130943 bp Feature: gene Location: 3520487-3522253 bp Ori: AZL44835.1 Feature: domain Description: P Location: 3520511-3522248 bp Feature: domain Description: P Location: 352 0511-352 2 2 48 bp Feature: gene Location: 3522253-3523278 bp Ori: AZL44836.1 Feature: domain Description: Q Location: 3522256-3523270 bp Feature: domain Description: Q Location: 352 2 2 56-352 32 70 bp Feature: gene Location: 3523314-3524243 bp Ori: AZL44837.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3523413-3523998 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 352 3413-352 3998 bp Feature: gene Location: 3524497-3525162 bp Feature: gene Location: 3525572-3526249 bp Feature: gene Location: 3526364-3526669 bp Ori: AZL44839.1 Feature: domain Description: DinI Location: 3526478-3526664 bp Feature: domain Description: DinI Location: 352 6478-352 6664 bp Feature: gene Location: 3526608-3526796 bp Feature: gene Location: 3526897-3528369 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3527296-3527977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 352 72 96-352 7977 bp Feature: gene Location: 3528845-3531259 bp Ori: AZL44840.1 Feature: domain Description: Phage_GPA Location: 3529409-3530375 bp Feature: domain Description: Phage_GPA Location: 352 9409-3530375 bp Feature: gene Location: 3531256-3532113 bp Ori: AZL44841.1 Feature: domain Description: dam Location: 3531259-3532036 bp Feature: domain Description: dam Location: 35312 59-3532 036 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10597 (DNA damage-inducible protein I; Provisional), HTH_Hin_like (cd00569), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183), P (PHA02535), Q (PHA02536), RVT-Retrons, Phage_GPA (pfam05840), dam (TIGR00571)