myRT

myRT report for GCA_003942025.1_ASM394202v1

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Seq: CP034240.1 Aliivibrio salmonicida strain VS224 chromosome I, complete sequence (3236208 bp)
Overview 1 RT 1: 2125597-2132659 bp Neighborhood of RT #1 [2125597, 2132754] RVT-GII GIIM zntA HDGYP HDGYP Feature: gene Location: 2125597-2125809 bp Feature: gene Location: 2125990-2126199 bp Feature: gene Location: 2126407-2127651 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2126620-2127220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 26620-21 27220 bp Feature: domain Description: GIIM Note: maturase Location: 2127262-2127484 bp Feature: domain Description: GIIM Note: maturase Location: 21 27262-21 27484 bp Feature: gene Location: 2127850-2130171 bp Ori: AZL85240.1 Feature: domain Description: zntA Location: 2127898-2130163 bp Feature: domain Description: zntA Location: 21 27898-21 301 63 bp Feature: gene Location: 2130232-2132754 bp Ori: AZL85241.1 Feature: domain Description: HDGYP Location: 2131387-2131852 bp Feature: domain Description: HDGYP Location: 21 31 387-21 31 852 bp Feature: domain Description: HDGYP Location: 2132314-2132659 bp Feature: domain Description: HDGYP Location: 21 3231 4-21 32659 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), zntA (PRK11033), HDGYP (COG2206)

Seq: CP034241.1 Aliivibrio salmonicida strain VS224 chromosome II, complete sequence (1207029 bp)
Overview 1 RT 1: 605437-608559 bp Neighborhood of RT #1 [605437, 608559] YafQ RelB RVT-UG15 Feature: gene Location: 605437-605706 bp Ori: AZL86675.1 Feature: domain Description: YafQ Location: 605440-605704 bp Feature: domain Description: YafQ Location: 605440-605704 bp Feature: gene Location: 605699-605977 bp Ori: AZL86676.1 Feature: domain Description: RelB Location: 605708-605948 bp Feature: domain Description: RelB Location: 605708-605948 bp Feature: gene Location: 606204-607796 bp Ori: AZL86677.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 606618-607032 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 606618-607032 bp Feature: gene Location: 607882-608088 bp Feature: gene Location: 608365-608559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YafQ (COG3041), RelB (pfam04221), RVT-UG15