myRT

myRT report for GCA_003945305.1_ASM394530v1

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Seq: AP019314.1 Microcystis viridis NIES-102 DNA, complete genome (5874197 bp)
Overview 1 RT 1: 2348073-2357552 bp 2 RT 2: 3664872-3672369 bp 3 RT 3: 4308597-4313827 bp 4 RT 4: 4918595-4924634 bp 5 RT 5: 5737333-5741909 bp Neighborhood of RT #1 [2348073, 2357674] KOG0157 PLPDE_III_AR RVT_N RVT-GII GIIM McrA RVT-GII YkfC McrA COG3950 COG3950 Neighborhood of RT #2 [3664872, 3672416] InsQ TPR_1 TPR_1 TPR_1 TPR_1 RVT_N RVT-GII GIIM McrA HflB HTH_1 PBP2_CbbR_RubisCO_like Neighborhood of RT #3 [4308597, 4313841] COG4679 RVT_N RVT-GII GIIM McrA RuvC wecB Neighborhood of RT #4 [4918595, 4924634] RVT_N RVT-GII GIIM McrA Neighborhood of RT #5 [5737333, 5742010] TIR_2 RVT_N RVT-GII GIIM McrA DUF433 DUF5615 Feature: gene Location: 2348073-2349377 bp Ori: BBH39674.1 Feature: domain Description: KOG0157 Location: 2348097-2349375 bp Feature: domain Description: KOG01 57 Location: 2348097-2349375 bp Feature: gene Location: 2349591-2350787 bp Ori: BBH39675.1 Feature: domain Description: PLPDE_III_AR Location: 2349675-2350776 bp Feature: domain Description: PLPDE_III_AR Location: 2349675-2350776 bp Feature: gene Location: 2351898-2353742 bp Ori: BBH39676.1 Feature: domain Description: RVT_N Location: 2351964-2352207 bp Feature: domain Description: RVT_N Location: 2351 964-2352207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2352252-2352924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2352252-2352924 bp Feature: domain Description: GIIM Note: maturase Location: 2353023-2353245 bp Feature: domain Description: GIIM Note: maturase Location: 2353023-2353245 bp Feature: domain Description: McrA Location: 2353248-2353629 bp Feature: domain Description: McrA Location: 2353248-2353629 bp Feature: gene Location: 2354432-2355907 bp Ori: BBH39677.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2354495-2355164 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2354495-23551 64 bp Feature: domain Description: YkfC Location: 2355290-2355575 bp Feature: domain Description: YkfC Location: 2355290-2355575 bp Feature: domain Description: McrA Location: 2355575-2355875 bp Feature: domain Description: McrA Location: 2355575-2355875 bp Feature: gene Location: 2355987-2356310 bp Feature: gene Location: 2356307-2357674 bp Ori: BBH39679.1 Feature: domain Description: COG3950 Location: 2356316-2356487 bp Feature: domain Description: COG3950 Location: 235631 6-2356487 bp Feature: domain Description: COG3950 Location: 2357063-2357552 bp Feature: domain Description: COG3950 Location: 2357063-2357552 bp Feature: gene Location: 3664872-3665558 bp Ori: BBH40828.1 Feature: domain Description: InsQ Location: 3664920-3665469 bp Feature: domain Description: InsQ Location: 3664920-3665469 bp Feature: gene Location: 3665693-3666877 bp Ori: BBH40829.1 Feature: domain Description: TPR_1 Location: 3666401-3666494 bp Feature: domain Description: TPR_1 Location: 3666401 -3666494 bp Feature: domain Description: TPR_1 Location: 3666500-3666599 bp Feature: domain Description: TPR_1 Location: 3666500-3666599 bp Feature: domain Description: TPR_1 Location: 3666614-3666701 bp Feature: domain Description: TPR_1 Location: 366661 4-3666701 bp Feature: domain Description: TPR_1 Location: 3666707-3666803 bp Feature: domain Description: TPR_1 Location: 3666707-3666803 bp Feature: gene Location: 3667616-3669460 bp Ori: BBH40830.1 Feature: domain Description: RVT_N Location: 3667682-3667925 bp Feature: domain Description: RVT_N Location: 3667682-3667925 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3667970-3668642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3667970-3668642 bp Feature: domain Description: GIIM Note: maturase Location: 3668741-3668963 bp Feature: domain Description: GIIM Note: maturase Location: 3668741 -3668963 bp Feature: domain Description: McrA Location: 3668966-3669347 bp Feature: domain Description: McrA Location: 3668966-3669347 bp Feature: gene Location: 3669570-3671447 bp Ori: BBH40831.1 Gene: ftsH_3 Feature: domain Description: HflB Location: 3669687-3671421 bp Feature: domain Description: HflB Location: 3669687-3671 421 bp Feature: gene Location: 3671496-3672416 bp Ori: BBH40832.1 Feature: domain Description: HTH_1 Location: 3671514-3671691 bp Feature: domain Description: HTH_1 Location: 3671 51 4-3671 691 bp Feature: domain Description: PBP2_CbbR_RubisCO_like Location: 3671781-3672369 bp Feature: domain Description: PBP2_CbbR_RubisCO_like Location: 3671 781 -3672369 bp Feature: gene Location: 4308597-4308983 bp Ori: BBH41445.1 Feature: domain Description: COG4679 Location: 4308642-4308978 bp Feature: domain Description: COG4679 Location: 4308642-4308978 bp Feature: gene Location: 4309011-4309304 bp Feature: gene Location: 4309898-4311742 bp Ori: BBH41447.1 Feature: domain Description: RVT_N Location: 4309964-4310207 bp Feature: domain Description: RVT_N Location: 4309964-431 0207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4310252-4310924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431 0252-431 0924 bp Feature: domain Description: GIIM Note: maturase Location: 4311023-4311245 bp Feature: domain Description: GIIM Note: maturase Location: 431 1 023-431 1 245 bp Feature: domain Description: McrA Location: 4311248-4311629 bp Feature: domain Description: McrA Location: 431 1 248-431 1 629 bp Feature: gene Location: 4312234-4312719 bp Ori: BBH41448.1 Gene: ruvC Feature: domain Description: RuvC Location: 4312249-4312696 bp Feature: domain Description: RuvC Location: 431 2249-431 2696 bp Feature: gene Location: 4312723-4313841 bp Ori: BBH41449.1 Feature: domain Description: wecB Location: 4312750-4313827 bp Feature: domain Description: wecB Location: 431 2750-431 3827 bp Feature: gene Location: 4918595-4918855 bp Feature: gene Location: 4918980-4919765 bp Feature: gene Location: 4920519-4922363 bp Ori: BBH42014.1 Feature: domain Description: RVT_N Location: 4920585-4920828 bp Feature: domain Description: RVT_N Location: 4920585-4920828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4920873-4921545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4920873-4921 545 bp Feature: domain Description: GIIM Note: maturase Location: 4921644-4921866 bp Feature: domain Description: GIIM Note: maturase Location: 4921 644-4921 866 bp Feature: domain Description: McrA Location: 4921869-4922250 bp Feature: domain Description: McrA Location: 4921 869-4922250 bp Feature: gene Location: 4923749-4924150 bp Feature: gene Location: 4924392-4924634 bp Feature: gene Location: 5737333-5737776 bp Ori: BBH42749.1 Feature: domain Description: TIR_2 Location: 5737342-5737648 bp Feature: domain Description: TIR_2 Location: 5737342-5737648 bp Feature: gene Location: 5738052-5738381 bp Feature: gene Location: 5738477-5740321 bp Ori: BBH42751.1 Feature: domain Description: RVT_N Location: 5738543-5738786 bp Feature: domain Description: RVT_N Location: 5738543-5738786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5738831-5739503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5738831 -5739503 bp Feature: domain Description: GIIM Note: maturase Location: 5739602-5739824 bp Feature: domain Description: GIIM Note: maturase Location: 5739602-5739824 bp Feature: domain Description: McrA Location: 5739827-5740208 bp Feature: domain Description: McrA Location: 5739827-5740208 bp Feature: gene Location: 5741320-5741670 bp Ori: BBH42752.1 Feature: domain Description: DUF433 Location: 5741368-5741500 bp Feature: domain Description: DUF433 Location: 5741 368-5741 500 bp Feature: gene Location: 5741648-5742010 bp Ori: BBH42753.1 Feature: domain Description: DUF5615 Location: 5741660-5741909 bp Feature: domain Description: DUF561 5 Location: 5741 660-5741 909 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG0157 (KOG0157, Cytochrome P450 CYP4/CYP19/CYP26 subfamilies ), PLPDE_III_AR (cd00430), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), YkfC (COG3344), COG3950 (Predicted ATP-binding protein involved in virulence ), InsQ (COG0675), TPR_1 (pfam00515)
HflB (COG0465), HTH_1 (pfam00126), PBP2_CbbR_RubisCO_like (cd08419), COG4679 (Phage-related protein ), RuvC (pfam02075), wecB (TIGR00236), TIR_2 (pfam13676), DUF433 (pfam04255), DUF5615 (pfam18480)