myRT

myRT report for GCA_003945525.1_ASM394552v1

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Seq: CP029601.1 Streptomyces sp. WAC 01438 chromosome, complete genome (8138328 bp)
Overview 1 RT 1: 585379-590803 bp 2 RT 2: 2668235-2671545 bp Neighborhood of RT #1 [585379, 590803] S_4TM Cas6 RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Neighborhood of RT #2 [2668235, 2671688] RVT-GII DEDD_Tnp_IS110 Transposase_20 Feature: gene Location: 585379-586254 bp Ori: AZM58590.1 Feature: domain Description: S_4TM Location: 585394-586192 bp Feature: domain Description: S_4TM Location: 585394-5861 92 bp Feature: gene Location: 586267-587025 bp Ori: AZM58591.1 Feature: domain Description: Cas6 Location: 586594-586981 bp Feature: domain Description: Cas6 Location: 586594-586981 bp Feature: gene Location: 587784-589466 bp Ori: AZM58592.1 Gene: cas1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 587799-588405 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 587799-588405 bp Feature: domain Description: Cas1_I-II-III Location: 588471-589425 bp Feature: domain Description: Cas1 _I-II-III Location: 588471 -589425 bp Feature: gene Location: 589474-589758 bp Ori: AZM58593.1 Gene: cas2 Feature: domain Description: Cas2_I_II_III Location: 589492-589723 bp Feature: domain Description: Cas2_I_II_III Location: 589492-589723 bp Feature: gene Location: 590502-590803 bp Feature: gene Location: 2668235-2668420 bp Feature: gene Location: 2668734-2669075 bp Feature: gene Location: 2669032-2669418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2669035-2669416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2669035-266941 6 bp Feature: gene Location: 2669361-2669579 bp Feature: gene Location: 2670471-2671688 bp Ori: AZM60120.1 Feature: domain Description: DEDD_Tnp_IS110 Location: 2670504-2670969 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 2670504-2670969 bp Feature: domain Description: Transposase_20 Location: 2671296-2671545 bp Feature: domain Description: Transposase_20 Location: 2671 296-2671 545 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT S_4TM (pfam18159), Cas6 (pfam09559), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442), RVT-GII, DEDD_Tnp_IS110 (pfam01548), Transposase_20 (pfam02371)