myRT

myRT report for GCA_003952485.1_ASM395248v1

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Seq: CP034447.1 Mesorhizobium sp. M1E.F.Ca.ET.045.02.1.1 chromosome, complete genome (7348390 bp)
Overview 1 RT 1: 423326-427773 bp 2 RT 2: 4028294-4032351 bp 3 RT 3: 4060266-4065855 bp Neighborhood of RT #1 [423326, 427895] RVT-GII AccC Tra5 Neighborhood of RT #2 [4028294, 4032866] Resolvase PRK06526 RVT-GII DDE_Tnp_IS66_C COG2936 Neighborhood of RT #3 [4060266, 4065855] ALDH_GABALDH-PuuC DapA RVT-GII Feature: gene Location: 423326-423714 bp Feature: gene Location: 423788-424837 bp Feature: gene Location: 424881-425121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 424884-424968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 424884-424968 bp Feature: gene Location: 425147-426382 bp Ori: AZO19587.1 Feature: domain Description: AccC Location: 425150-426374 bp Feature: domain Description: AccC Location: 4251 50-426374 bp Feature: gene Location: 426705-427895 bp Feature: domain Description: Tra5 Location: 427023-427773 bp Feature: domain Description: Tra5 Location: 427023-427773 bp Feature: gene Location: 4028294-4028841 bp Feature: domain Description: Resolvase Location: 4028309-4028435 bp Feature: domain Description: Resolvase Location: 4028309-4028435 bp Feature: gene Location: 4028853-4029101 bp Feature: domain Description: PRK06526 Location: 4028865-4029096 bp Feature: domain Description: PRK06526 Location: 4028865-4029096 bp Feature: gene Location: 4029042-4029881 bp Ori: AZO22644.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4029150-4029711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40291 50-402971 1 bp Feature: gene Location: 4029893-4030003 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4029896-4029962 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4029896-4029962 bp Feature: gene Location: 4030725-4032866 bp Ori: AZO25801.1 Feature: domain Description: COG2936 Location: 4030866-4032351 bp Feature: domain Description: COG2936 Location: 4030866-4032351 bp Feature: gene Location: 4060266-4061744 bp Ori: AZO22662.1 Feature: domain Description: ALDH_GABALDH-PuuC Location: 4060347-4061733 bp Feature: domain Description: ALDH_GABALDH-PuuC Location: 4060347-4061 733 bp Feature: gene Location: 4061773-4062684 bp Ori: AZO22663.1 Feature: domain Description: DapA Location: 4061788-4062655 bp Feature: domain Description: DapA Location: 4061 788-4062655 bp Feature: gene Location: 4062812-4063123 bp Ori: AZO22664.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4062827-4062905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4062827-4062905 bp Feature: gene Location: 4063099-4063929 bp Feature: gene Location: 4064998-4065855 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, AccC (COG0439), Tra5 (COG2801), Resolvase (smart00857), PRK06526 (transposase; Provisional), DDE_Tnp_IS66_C (pfam13817), COG2936 (Predicted acyl esterase ), ALDH_GABALDH-PuuC (cd07112), DapA (COG0329)