myRT

myRT report for GCA_003952785.1_ASM395278v1

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Seq: CP022298.1 Acinetobacter johnsonii strain IC001 chromosome, complete genome (3610322 bp)
Overview 1 RT 1: 249099-254421 bp 2 RT 2: 2948676-2954619 bp Neighborhood of RT #1 [249099, 254450] DDE_Tnp_IS66_C RVT_N RVT-GII GIIM DUF3287 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 Neighborhood of RT #2 [2948676, 2954648] DLH DDE_Tnp_IS66_C RVT_N RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 Feature: gene Location: 249099-249671 bp Feature: gene Location: 250037-250264 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 250130-250241 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2501 30-250241 bp Feature: gene Location: 250369-252030 bp Ori: AZN62728.1 Gene: ltrA Feature: domain Description: RVT_N Location: 250414-250657 bp Feature: domain Description: RVT_N Location: 25041 4-250657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 250702-251338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 250702-251 338 bp Feature: domain Description: GIIM Note: maturase Location: 251392-251623 bp Feature: domain Description: GIIM Note: maturase Location: 251 392-251 623 bp Feature: gene Location: 252607-253986 bp Feature: domain Description: DUF3287 Location: 252631-252760 bp Feature: domain Description: DUF3287 Location: 252631 -252760 bp Feature: domain Description: LZ_Tnp_IS66 Location: 252778-253003 bp Feature: domain Description: LZ_Tnp_IS66 Location: 252778-253003 bp Feature: domain Description: zf-IS66 Location: 253027-253153 bp Feature: domain Description: zf-IS66 Location: 253027-2531 53 bp Feature: domain Description: DDE_Tnp_IS66 Location: 253195-253987 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2531 95-253987 bp Feature: gene Location: 254061-254450 bp Ori: AZN62729.1 Feature: domain Description: TnpB_IS66 Location: 254133-254421 bp Feature: domain Description: TnpB_IS66 Location: 2541 33-254421 bp Feature: gene Location: 2948676-2949926 bp Feature: domain Description: DLH Location: 2948685-2949375 bp Feature: domain Description: DLH Location: 2948685-2949375 bp Feature: gene Location: 2950172-2950399 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2950265-2950376 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2950265-2950376 bp Feature: gene Location: 2950504-2952165 bp Ori: AZN65156.1 Gene: ltrA Feature: domain Description: RVT_N Location: 2950549-2950792 bp Feature: domain Description: RVT_N Location: 2950549-2950792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2950837-2951473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2950837-2951 473 bp Feature: domain Description: GIIM Note: maturase Location: 2951527-2951758 bp Feature: domain Description: GIIM Note: maturase Location: 2951 527-2951 758 bp Feature: gene Location: 2952742-2954184 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2952979-2953201 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2952979-2953201 bp Feature: domain Description: zf-IS66 Location: 2953225-2953351 bp Feature: domain Description: zf-IS66 Location: 2953225-2953351 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2953393-2954185 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2953393-29541 85 bp Feature: gene Location: 2954259-2954648 bp Ori: AZN65157.1 Feature: domain Description: TnpB_IS66 Location: 2954331-2954619 bp Feature: domain Description: TnpB_IS66 Location: 2954331 -295461 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF3287 (pfam11690), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), TnpB_IS66 (pfam05717), DLH (pfam01738)