myRT

myRT report for GCA_003955735.1_ASM395573v1

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Seq: CP034464.1 Undibacterium parvum strain DSM 23061 chromosome, complete genome (4910324 bp)
Overview 1 RT 1: 885463-894125 bp 2 RT 2: 3914645-3919589 bp Neighborhood of RT #1 [885463, 894439] TnpB_IS66 RVT-UG1 nitrilase_Rim1_like DUF45 COG0610 Neighborhood of RT #2 [3914645, 3919589] RVT-Retrons Feature: gene Location: 885463-885810 bp Ori: AZP11210.1 Feature: domain Description: TnpB_IS66 Location: 885490-885778 bp Feature: domain Description: TnpB_IS66 Location: 885490-885778 bp Feature: gene Location: 885807-886208 bp Feature: gene Location: 886688-890377 bp Ori: AZP11212.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 887312-887807 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 88731 2-887807 bp Feature: domain Description: nitrilase_Rim1_like Location: 889766-890084 bp Feature: domain Description: nitrilase_Rim1 _like Location: 889766-890084 bp Feature: gene Location: 890580-891296 bp Ori: AZP11213.1 Feature: domain Description: DUF45 Location: 890652-891264 bp Feature: domain Description: DUF45 Location: 890652-891 264 bp Feature: gene Location: 891296-894439 bp Ori: AZP11214.1 Feature: domain Description: COG0610 Location: 891320-894125 bp Feature: domain Description: COG061 0 Location: 891 320-8941 25 bp Feature: gene Location: 3914645-3915163 bp Feature: gene Location: 3915156-3915890 bp Feature: gene Location: 3916033-3917013 bp Ori: AZP13563.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3916282-3916810 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 391 6282-391 681 0 bp Feature: gene Location: 3917928-3918395 bp Feature: gene Location: 3919374-3919589 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), RVT-UG1, nitrilase_Rim1_like (cd07574), DUF45 (pfam01863), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-Retrons