myRT

myRT report for GCA_003956245.1_ASM395624v1

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Seq: CP025840.1 Escherichia coli strain 214-4 chromosome, complete genome (5138709 bp)
Overview 1 RT 1: 3795792-3801077 bp 2 RT 2: 4380973-4384860 bp Neighborhood of RT #1 [3795792, 3801094] InsE PHA02517 RVT-GII GIIM PHA02517 LysM IAT_beta PRK15318 Invasin_D3 Neighborhood of RT #2 [4380973, 4384860] PRK01271 YhhI YhhI RVT-GII GIIM Feature: gene Location: 3795792-3796076 bp Feature: domain Description: InsE Location: 3795804-3796065 bp Feature: domain Description: InsE Location: 3795804-3796065 bp Feature: gene Location: 3796118-3796543 bp Feature: domain Description: PHA02517 Location: 3796139-3796478 bp Feature: domain Description: PHA0251 7 Location: 37961 39-3796478 bp Feature: gene Location: 3797135-3798658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3797408-3798140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3797408-37981 40 bp Feature: domain Description: GIIM Note: maturase Location: 3798215-3798413 bp Feature: domain Description: GIIM Note: maturase Location: 379821 5-379841 3 bp Feature: gene Location: 3798781-3799215 bp Feature: domain Description: PHA02517 Location: 3798784-3799207 bp Feature: domain Description: PHA0251 7 Location: 3798784-3799207 bp Feature: gene Location: 3799217-3801094 bp Feature: domain Description: LysM Location: 3799457-3799595 bp Feature: domain Description: LysM Location: 3799457-3799595 bp Feature: domain Description: IAT_beta Location: 3799676-3800501 bp Feature: domain Description: IAT_beta Location: 3799676-3800501 bp Feature: domain Description: PRK15318 Location: 3800702-3800825 bp Feature: domain Description: PRK1 531 8 Location: 3800702-3800825 bp Feature: domain Description: Invasin_D3 Location: 3800840-3801077 bp Feature: domain Description: Invasin_D3 Location: 3800840-3801 077 bp Feature: gene Location: 4380973-4381200 bp Feature: domain Description: PRK01271 Location: 4380976-4381198 bp Feature: domain Description: PRK01 271 Location: 4380976-4381 1 98 bp Feature: gene Location: 4381233-4382024 bp Feature: domain Description: YhhI Location: 4381236-4381599 bp Feature: domain Description: YhhI Location: 4381 236-4381 599 bp Feature: domain Description: YhhI Location: 4381656-4382007 bp Feature: domain Description: YhhI Location: 4381 656-4382007 bp Feature: gene Location: 4382231-4383730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4382684-4383341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4382684-4383341 bp Feature: domain Description: GIIM Note: maturase Location: 4383425-4383635 bp Feature: domain Description: GIIM Note: maturase Location: 4383425-4383635 bp Feature: gene Location: 4384079-4384453 bp Feature: gene Location: 4384690-4384860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), LysM (smart00257), IAT_beta (pfam11924), PRK15318 (intimin-like protein SinH; Provisional), Invasin_D3 (pfam09134), PRK01271 (tautomerase PptA), YhhI (COG5433)