myRT

myRT report for GCA_003956265.1_ASM395626v1

Download annotations/find similar RTs

Seq: CP025851.1 Escherichia coli strain 510016 chromosome, complete genome (4885058 bp)
Overview 1 RT 1: 3286943-3291095 bp Neighborhood of RT #1 [3286943, 3291095] DUF4094 Peptidase_S74 RVT-UG17 DDE_Tnp_IS1 Feature: gene Location: 3286943-3287632 bp Feature: domain Description: DUF4094 Location: 3286985-3287075 bp Feature: domain Description: DUF4094 Location: 3286985-3287075 bp Feature: domain Description: Peptidase_S74 Location: 3287291-3287450 bp Feature: domain Description: Peptidase_S74 Location: 3287291 -3287450 bp Feature: gene Location: 3287658-3287945 bp Feature: gene Location: 3288053-3289423 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3288281-3288887 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 3288281 -3288887 bp Feature: gene Location: 3289826-3290329 bp Feature: domain Description: DDE_Tnp_IS1 Location: 3289937-3290327 bp Feature: domain Description: DDE_Tnp_IS1 Location: 3289937-3290327 bp Feature: gene Location: 3290856-3291095 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4094 (pfam13334), Peptidase_S74 (pfam13884), RVT-UG17, DDE_Tnp_IS1 (pfam03400)

Seq: CP025854.1 Escherichia coli strain 510016 plasmid p510016_80, complete sequence (80573 bp)
Overview 1 RT 1: 34735-41782 bp Neighborhood of RT #1 [34735, 41802] PRK09183 COG4584 RVT_N RVT-GII COG4584 PRK09183 RVT-GII GIIM HNHc IS285 InsE Feature: gene Location: 34735-35529 bp Feature: domain Description: PRK09183 Location: 34744-35482 bp Feature: domain Description: PRK09183 Location: 34744-35482 bp Feature: gene Location: 35529-36701 bp Feature: domain Description: COG4584 Location: 35532-36369 bp Feature: domain Description: COG4584 Location: 35532 -36369 bp Feature: gene Location: 36742-37320 bp Feature: domain Description: RVT_N Location: 36868-37105 bp Feature: domain Description: RVT_N Location: 36868-37105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37156-37252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37156-372 52 bp Feature: gene Location: 37334-38356 bp Feature: domain Description: COG4584 Location: 37337-38207 bp Feature: domain Description: COG4584 Location: 37337-382 07 bp Feature: gene Location: 38356-39135 bp Feature: domain Description: PRK09183 Location: 38362-39133 bp Feature: domain Description: PRK09183 Location: 38362 -39133 bp Feature: gene Location: 39151-40446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39196-39757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39196-39757 bp Feature: domain Description: GIIM Note: maturase Location: 39808-40042 bp Feature: domain Description: GIIM Note: maturase Location: 39808-40042 bp Feature: domain Description: HNHc Note: nucleases Location: 40252-40411 bp Feature: domain Description: HNHc Note: nucleases Location: 402 52 -40411 bp Feature: gene Location: 40698-41528 bp Feature: domain Description: IS285 Location: 40851-41517 bp Feature: domain Description: IS2 85 Location: 40851-41517 bp Feature: gene Location: 41383-41802 bp Feature: domain Description: InsE Location: 41398-41782 bp Feature: domain Description: InsE Location: 41398-41782 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09183 (transposase/IS protein; Provisional), COG4584 (Transposase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), IS285 (COG3328), InsE (COG2963)