myRT

myRT report for GCA_003956385.1_ASM395638v1

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Seq: CP025849.1 Escherichia coli strain 600468 chromosome, complete genome (4818782 bp)
Overview 1 RT 1: 4462224-4465137 bp Neighborhood of RT #1 [4462224, 4465202] RVT-GII PHA02517 Feature: gene Location: 4462224-4462367 bp Feature: gene Location: 4462392-4462595 bp Feature: gene Location: 4462893-4464185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4463166-4463898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44631 66-4463898 bp Feature: gene Location: 4464139-4464564 bp Feature: gene Location: 4464777-4465202 bp Feature: domain Description: PHA02517 Location: 4464801-4465137 bp Feature: domain Description: PHA0251 7 Location: 4464801 -44651 37 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)

Seq: CP025850.1 Escherichia coli strain 600468 plasmid p600468_158, complete sequence (158237 bp)
Overview 1 RT 1: 40380-44245 bp Neighborhood of RT #1 [40380, 44268] Tra5 HTH_28 HTH_28 RVT-GII CblD HTH_ARAC Feature: gene Location: 40380-41243 bp Feature: domain Description: Tra5 Location: 40512-41232 bp Feature: domain Description: Tra5 Location: 40512 -412 32 bp Feature: gene Location: 41219-41725 bp Feature: domain Description: HTH_28 Location: 41249-41393 bp Feature: domain Description: HTH_2 8 Location: 412 49-41393 bp Feature: domain Description: HTH_28 Location: 41411-41552 bp Feature: domain Description: HTH_2 8 Location: 41411-41552 bp Feature: gene Location: 41908-42813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42109-42760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 109-42 760 bp Feature: gene Location: 42932-43309 bp Feature: domain Description: CblD Location: 42935-43301 bp Feature: domain Description: CblD Location: 42 935-43301 bp Feature: gene Location: 43471-44268 bp Feature: domain Description: HTH_ARAC Location: 44002-44245 bp Feature: domain Description: HTH_ARAC Location: 44002 -442 45 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), HTH_28 (pfam13518), RVT-GII, CblD (pfam07434), HTH_ARAC (smart00342)