myRT

myRT report for GCA_003966315.1_ASM396631v1

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Seq: CP034546.1 Burkholderia cenocepacia strain YG-3 chromosome 2, complete sequence (1350848 bp)
Overview 1 RT 1: 101007-105619 bp Neighborhood of RT #1 [101007, 105642] Histone_HNS RVT-Retrons his_ut_repres HutH Feature: gene Location: 101007-101336 bp Ori: AZQ52905.1 Feature: domain Description: Histone_HNS Location: 101031-101265 bp Feature: domain Description: Histone_HNS Location: 1 01 031 -1 01 265 bp Feature: gene Location: 101483-101692 bp Feature: gene Location: 101665-103014 bp Ori: AZQ52906.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 102130-102766 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 021 30-1 02766 bp Feature: gene Location: 103343-104098 bp Ori: AZQ52907.1 Gene: hutC Feature: domain Description: his_ut_repres Location: 103421-104093 bp Feature: domain Description: his_ut_repres Location: 1 03421 -1 04093 bp Feature: gene Location: 104149-105642 bp Ori: AZQ52908.1 Feature: domain Description: HutH Location: 104161-105619 bp Feature: domain Description: HutH Location: 1 041 61 -1 0561 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-Retrons, his_ut_repres (TIGR02018), HutH (COG2986)

Seq: CP034547.1 Burkholderia cenocepacia strain YG-3 chromosome 3, complete sequence (3039797 bp)
Overview 1 RT 1: 2440520-2445443 bp Neighborhood of RT #1 [2440520, 2445443] Arm-DNA-bind_3 INT_P4_C RVT-Retrons Phage_AlpA Feature: gene Location: 2440520-2441794 bp Ori: AZQ55974.1 Feature: domain Description: Arm-DNA-bind_3 Location: 2440574-2440781 bp Feature: domain Description: Arm-DNA-bind_3 Location: 2 440574-2 440781 bp Feature: domain Description: INT_P4_C Location: 2441183-2441762 bp Feature: domain Description: INT_P4_C Location: 2 441183-2 441762 bp Feature: gene Location: 2442106-2443326 bp Feature: gene Location: 2443501-2444715 bp Ori: AZQ55976.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2443720-2444374 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 44372 0-2 444374 bp Feature: gene Location: 2444899-2445177 bp Ori: AZQ56585.1 Feature: domain Description: Phage_AlpA Location: 2444917-2445055 bp Feature: domain Description: Phage_AlpA Location: 2 444917-2 445055 bp Feature: gene Location: 2445234-2445443 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801), RVT-Retrons, Phage_AlpA (pfam05930)

Seq: CP034545.1 Burkholderia cenocepacia strain YG-3 chromosome 1, complete sequence (3645818 bp)
Overview 1 RT 1: 1094537-1098874 bp Neighborhood of RT #1 [1094537, 1098915] KOG3954 RVT-GII PRK00711 Feature: gene Location: 1094537-1095472 bp Ori: AZQ50475.1 Feature: domain Description: KOG3954 Location: 1094543-1095467 bp Feature: domain Description: KOG3 954 Location: 1094543 -1095467 bp Feature: gene Location: 1095538-1095867 bp Feature: gene Location: 1095918-1097283 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1096254-1096566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1096254-1096566 bp Feature: gene Location: 1097278-1097502 bp Feature: gene Location: 1097629-1098915 bp Ori: AZQ50478.1 Feature: domain Description: PRK00711 Location: 1097632-1098874 bp Feature: domain Description: PRK00711 Location: 109763 2-1098874 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG3954 (KOG3954, Electron transfer flavoprotein, alpha subunit ), RVT-GII, PRK00711 (D-amino acid dehydrogenase)