myRT

myRT report for GCA_003966405.1_ASM396640v1

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Seq: AP018547.1 Enterococcus faecalis plasmid pKUB3007-4 KUB3007 DNA, complete genome (36331 bp)
Overview 1 RT 1: 28645-32224 bp Neighborhood of RT #1 [28645, 32781] SR_ResInv HTH_Hin_like RVT-Retrons PemK_toxin Relaxase Feature: gene Location: 28645-29223 bp Ori: BBD29650.1 Feature: domain Description: SR_ResInv Location: 28651-29023 bp Feature: domain Description: SR_ResInv Location: 28651 -29023 bp Feature: domain Description: HTH_Hin_like Location: 29065-29182 bp Feature: domain Description: HTH_Hin_like Location: 29065-291 82 bp Feature: gene Location: 29731-30012 bp Feature: gene Location: 29993-30958 bp Ori: BBD29652.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30128-30683 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 301 28-30683 bp Feature: gene Location: 31064-31429 bp Ori: BBD29653.1 Feature: domain Description: PemK_toxin Location: 31091-31418 bp Feature: domain Description: PemK_toxin Location: 31 091 -31 41 8 bp Feature: gene Location: 31480-32781 bp Ori: BBD29654.1 Feature: domain Description: Relaxase Location: 31519-32224 bp Feature: domain Description: Relaxase Location: 31 51 9-32224 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_ResInv (cd03768), HTH_Hin_like (cd00569), RVT-Retrons, PemK_toxin (pfam02452), Relaxase (pfam03432)

Seq: AP018545.1 Enterococcus faecalis plasmid pKUB3007-2 KUB3007 DNA, complete genome (79566 bp)
Overview 1 RT 1: 29176-34652 bp Neighborhood of RT #1 [29176, 34699] DUF3991 Toprim_2 CwlT_like CHAP RVT-GII HNHc PemK_toxin Feature: gene Location: 29176-30330 bp Ori: BBD29506.1 Feature: domain Description: DUF3991 Location: 29593-29803 bp Feature: domain Description: DUF3991 Location: 2 9593-2 9803 bp Feature: domain Description: Toprim_2 Location: 29902-30211 bp Feature: domain Description: Toprim_2 Location: 2 9902 -302 11 bp Feature: gene Location: 30327-31361 bp Ori: BBD29507.1 Feature: domain Description: CwlT_like Location: 30516-30966 bp Feature: domain Description: CwlT_like Location: 30516-30966 bp Feature: domain Description: CHAP Location: 31047-31329 bp Feature: domain Description: CHAP Location: 31047-3132 9 bp Feature: gene Location: 32030-33835 bp Ori: BBD29508.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32327-33026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 32 7-3302 6 bp Feature: domain Description: HNHc Note: nucleases Location: 33569-33698 bp Feature: domain Description: HNHc Note: nucleases Location: 33569-33698 bp Feature: gene Location: 34125-34373 bp Feature: gene Location: 34373-34699 bp Ori: BBD29510.1 Feature: domain Description: PemK_toxin Location: 34388-34652 bp Feature: domain Description: PemK_toxin Location: 34388-34652 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3991 (pfam13154), Toprim_2 (pfam13155), CwlT_like, CHAP (pfam05257), RVT-GII, HNHc (smart00507), PemK_toxin (pfam02452)