myRT

myRT report for GCA_003970675.1_ASM397067v1

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Seq: CP034562.1 Flammeovirga sp. L12M1 chromosome 1, complete sequence (5207776 bp)
Overview 1 RT 1: 3238925-3243916 bp Neighborhood of RT #1 [3238925, 3243954] RVT-GII GIIM COG3177 Feature: gene Location: 3238925-3239671 bp Feature: gene Location: 3239755-3240495 bp Feature: gene Location: 3240601-3241797 bp Ori: AZQ63123.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3240718-3241336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 324071 8-3241 336 bp Feature: domain Description: GIIM Note: maturase Location: 3241408-3241618 bp Feature: domain Description: GIIM Note: maturase Location: 3241 408-3241 61 8 bp Feature: gene Location: 3241965-3242516 bp Feature: gene Location: 3242818-3243954 bp Feature: domain Description: COG3177 Location: 3242839-3243916 bp Feature: domain Description: COG31 77 Location: 3242839-324391 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3177 (Fic family protein )

Seq: CP034563.1 Flammeovirga sp. L12M1 chromosome 2, complete sequence (1411355 bp)
Overview 1 RT 1: 1149953-1157047 bp Neighborhood of RT #1 [1149953, 1157112] COG4584 RVT-GII GIIM Phage_int_SAM_4 INT_IntI_C Feature: gene Location: 1149953-1151482 bp Ori: AZQ65379.1 Feature: domain Description: COG4584 Location: 1150262-1150811 bp Feature: domain Description: COG4584 Location: 11502 62 -1150811 bp Feature: gene Location: 1151553-1151732 bp Feature: gene Location: 1152073-1153347 bp Ori: AZQ65381.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1152268-1152886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1152 2 68-1152 886 bp Feature: domain Description: GIIM Note: maturase Location: 1152958-1153168 bp Feature: domain Description: GIIM Note: maturase Location: 1152 958-1153168 bp Feature: gene Location: 1154831-1155580 bp Feature: gene Location: 1156279-1157112 bp Ori: AZQ65383.1 Feature: domain Description: Phage_int_SAM_4 Location: 1156285-1156504 bp Feature: domain Description: Phage_int_SAM_4 Location: 11562 85-1156504 bp Feature: domain Description: INT_IntI_C Location: 1156564-1157047 bp Feature: domain Description: INT_IntI_C Location: 1156564-1157047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4584 (Transposase ), RVT-GII, GIIM (pfam08388), Phage_int_SAM_4 (pfam13495), INT_IntI_C (cd01193)