myRT

myRT report for GCA_003990395.1_ASM399039v1

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Seq: CP034675.1 Cellulosilyticum sp. WCF-2 chromosome, complete genome (4779774 bp)
Overview 1 RT 1: 1643412-1653361 bp 2 RT 2: 2972985-2976496 bp 3 RT 3: 3056736-3059489 bp 4 RT 4: 3711890-3715869 bp Neighborhood of RT #1 [1643412, 1653361] Tar PRK05431 RVT-Retrons Neighborhood of RT #2 [2972985, 2976528] PHA02517 RVT_N RVT-GII PHA02517 PilZ Neighborhood of RT #3 [3056736, 3059509] TIGR03833 PHA02517 RVT-GII RVT_N PHA02517 Neighborhood of RT #4 [3711890, 3715869] Mrr_cat RVT-GII GIIM RVT-GII Feature: gene Location: 1643412-1644935 bp Feature: domain Description: Tar Location: 1644039-1644921 bp Feature: domain Description: Tar Location: 1 644039-1 644921 bp Feature: gene Location: 1645406-1646689 bp Feature: domain Description: PRK05431 Location: 1645409-1646675 bp Feature: domain Description: PRK05431 Location: 1 645409-1 646675 bp Feature: gene Location: 1647119-1648606 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1647752-1648376 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 647752-1 648376 bp Feature: gene Location: 1648603-1650411 bp Feature: gene Location: 1650401-1653361 bp Feature: gene Location: 2972985-2973551 bp Feature: domain Description: PHA02517 Location: 2973000-2973531 bp Feature: domain Description: PHA0251 7 Location: 2973000-2973531 bp Feature: gene Location: 2974082-2974432 bp Feature: domain Description: RVT_N Location: 2974154-2974397 bp Feature: domain Description: RVT_N Location: 29741 54-2974397 bp Feature: gene Location: 2974487-2975290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2974490-2974946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2974490-2974946 bp Feature: gene Location: 2975400-2975657 bp Feature: domain Description: PHA02517 Location: 2975406-2975637 bp Feature: domain Description: PHA0251 7 Location: 2975406-2975637 bp Feature: gene Location: 2975815-2976528 bp Feature: domain Description: PilZ Location: 2976160-2976496 bp Feature: domain Description: PilZ Location: 29761 60-2976496 bp Feature: gene Location: 3056736-3056927 bp Feature: domain Description: TIGR03833 Location: 3056742-3056922 bp Feature: domain Description: TIGR03833 Location: 3056742-3056922 bp Feature: gene Location: 3057059-3057292 bp Feature: domain Description: PHA02517 Location: 3057065-3057284 bp Feature: domain Description: PHA0251 7 Location: 3057065-3057284 bp Feature: gene Location: 3057423-3058226 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3057426-3057882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3057426-3057882 bp Feature: gene Location: 3058281-3058631 bp Feature: domain Description: RVT_N Location: 3058353-3058596 bp Feature: domain Description: RVT_N Location: 3058353-3058596 bp Feature: gene Location: 3059162-3059509 bp Feature: domain Description: PHA02517 Location: 3059222-3059489 bp Feature: domain Description: PHA0251 7 Location: 3059222-3059489 bp Feature: gene Location: 3711890-3712372 bp Feature: gene Location: 3712347-3713501 bp Feature: domain Description: Mrr_cat Location: 3712491-3712827 bp Feature: domain Description: Mrr_cat Location: 371 2491 -371 2827 bp Feature: gene Location: 3714026-3714520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3714035-3714317 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 371 4035-371 431 7 bp Feature: domain Description: GIIM Note: maturase Location: 3714371-3714506 bp Feature: domain Description: GIIM Note: maturase Location: 371 4371 -371 4506 bp Feature: gene Location: 3714553-3714792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3714556-3714778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 371 4556-371 4778 bp Feature: gene Location: 3714903-3715202 bp Feature: gene Location: 3715600-3715869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tar (COG0840), PRK05431 (seryl-tRNA synthetase; Provisional), RVT-Retrons, PHA02517 (putative transposase OrfB; Reviewed), RVT_N (pfam13655), RVT-GII, PilZ (pfam07238), TIGR03833 (conserved hypothetical protein), Mrr_cat (pfam04471), GIIM (pfam08388)