myRT

myRT report for GCA_003990665.2_ASM399066v2

Download annotations/find similar RTs

Seq: AP018202.2 Thermosynechococcus vulcanus NIES-2134 DNA, complete genome, strain: NIES-2134 (2571271 bp)
Overview 1 RT 1: 25141-30477 bp 2 RT 2: 393763-401874 bp 3 RT 3: 1020024-1026053 bp 4 RT 4: 2453129-2459299 bp Neighborhood of RT #1 [25141, 30569] PRK09303 RVT_N RVT-GII GIIM HNHc HAD_BPGM-like Neighborhood of RT #2 [393763, 401987] NblA lipid_A_lpxD RVT_N RVT-GII GIIM HNHc clpC NHL_like_3 YebA Neighborhood of RT #3 [1020024, 1026118] InsQ RVT_N RVT-GII GIIM HNHc NifS IncA Neighborhood of RT #4 [2453129, 2459322] PRK14012 RVT_N RVT-GII GIIM HNHc ftrB agmatine_aguB Feature: gene Location: 25141-26283 bp Ori: BAY52363.1 Feature: domain Description: PRK09303 Location: 25162-26281 bp Feature: domain Description: PRK09303 Location: 251 62-26281 bp Feature: gene Location: 26280-27239 bp Feature: gene Location: 27977-29650 bp Ori: BAY52361.1 Feature: domain Description: RVT_N Location: 28031-28274 bp Feature: domain Description: RVT_N Location: 28031 -28274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28319-28937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2831 9-28937 bp Feature: domain Description: GIIM Note: maturase Location: 28988-29222 bp Feature: domain Description: GIIM Note: maturase Location: 28988-29222 bp Feature: domain Description: HNHc Note: nucleases Location: 29429-29603 bp Feature: domain Description: HNHc Note: nucleases Location: 29429-29603 bp Feature: gene Location: 29713-29844 bp Feature: gene Location: 29877-30569 bp Ori: BAY52359.1 Feature: domain Description: HAD_BPGM-like Location: 29925-30477 bp Feature: domain Description: HAD_BPGM-like Location: 29925-30477 bp Feature: gene Location: 393763-393948 bp Ori: BAY52016.1 Gene: nblA Feature: domain Description: NblA Location: 393796-393940 bp Feature: domain Description: NblA Location: 393796-393940 bp Feature: gene Location: 394152-395168 bp Ori: BAY52015.1 Feature: domain Description: lipid_A_lpxD Location: 394167-395136 bp Feature: domain Description: lipid_A_lpxD Location: 3941 67-3951 36 bp Feature: gene Location: 395263-396936 bp Ori: BAY52014.1 Feature: domain Description: RVT_N Location: 395317-395560 bp Feature: domain Description: RVT_N Location: 39531 7-395560 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 395605-396223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 395605-396223 bp Feature: domain Description: GIIM Note: maturase Location: 396274-396508 bp Feature: domain Description: GIIM Note: maturase Location: 396274-396508 bp Feature: domain Description: HNHc Note: nucleases Location: 396715-396889 bp Feature: domain Description: HNHc Note: nucleases Location: 39671 5-396889 bp Feature: gene Location: 397777-400251 bp Ori: BAY52013.1 Gene: clpC Feature: domain Description: clpC Location: 397780-400204 bp Feature: domain Description: clpC Location: 397780-400204 bp Feature: gene Location: 400266-401987 bp Ori: BAY52012.1 Feature: domain Description: NHL_like_3 Location: 400671-400956 bp Feature: domain Description: NHL_like_3 Location: 400671 -400956 bp Feature: domain Description: YebA Location: 401346-401874 bp Feature: domain Description: YebA Location: 401 346-401 874 bp Feature: gene Location: 1020024-1020611 bp Feature: gene Location: 1020648-1021820 bp Ori: BAY51407.1 Feature: domain Description: InsQ Location: 1020651-1021770 bp Feature: domain Description: InsQ Location: 1 020651 -1 021 770 bp Feature: gene Location: 1022111-1023784 bp Ori: BAY51406.1 Feature: domain Description: RVT_N Location: 1022165-1022408 bp Feature: domain Description: RVT_N Location: 1 0221 65-1 022408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1022453-1023071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 022453-1 023071 bp Feature: domain Description: GIIM Note: maturase Location: 1023122-1023356 bp Feature: domain Description: GIIM Note: maturase Location: 1 0231 22-1 023356 bp Feature: domain Description: HNHc Note: nucleases Location: 1023563-1023737 bp Feature: domain Description: HNHc Note: nucleases Location: 1 023563-1 023737 bp Feature: gene Location: 1024491-1025660 bp Ori: BAY51405.1 Gene: nifS_1 Feature: domain Description: NifS Location: 1024494-1025625 bp Feature: domain Description: NifS Location: 1 024494-1 025625 bp Feature: gene Location: 1025669-1026118 bp Ori: BAY51404.1 Feature: domain Description: IncA Location: 1025699-1026053 bp Feature: domain Description: IncA Location: 1 025699-1 026053 bp Feature: gene Location: 2453129-2453482 bp Feature: gene Location: 2453797-2454948 bp Ori: BAY52512.1 Gene: nifS_3 Feature: domain Description: PRK14012 Location: 2453803-2454940 bp Feature: domain Description: PRK1 401 2 Location: 2453803-2454940 bp Feature: gene Location: 2455705-2457378 bp Ori: BAY52511.1 Feature: domain Description: RVT_N Location: 2455759-2456002 bp Feature: domain Description: RVT_N Location: 2455759-2456002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2456047-2456665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2456047-2456665 bp Feature: domain Description: GIIM Note: maturase Location: 2456716-2456950 bp Feature: domain Description: GIIM Note: maturase Location: 245671 6-2456950 bp Feature: domain Description: HNHc Note: nucleases Location: 2457157-2457331 bp Feature: domain Description: HNHc Note: nucleases Location: 24571 57-2457331 bp Feature: gene Location: 2457595-2457966 bp Ori: BAY52510.1 Gene: ftrC Feature: domain Description: ftrB Location: 2457619-2457943 bp Feature: domain Description: ftrB Location: 245761 9-2457943 bp Feature: gene Location: 2458465-2459322 bp Ori: BAY52509.1 Feature: domain Description: agmatine_aguB Location: 2458477-2459299 bp Feature: domain Description: agmatine_aguB Location: 2458477-2459299 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09303 (histidine kinase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), HAD_BPGM-like (cd16423), NblA (pfam04485), lipid_A_lpxD (TIGR01853), clpC, NHL_like_3 (cd14956)
YebA (COG1305), InsQ (COG0675), NifS (COG1104), IncA, PRK14012 (IscS subfamily cysteine desulfurase), ftrB (PRK09392), agmatine_aguB (TIGR03381)