myRT

myRT report for GCA_003991175.1_ASM399117v1

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Seq: CP021436.1 Bacillus thuringiensis strain C15 chromosome, complete genome (5637049 bp)
Overview 1 RT 1: 180318-184340 bp 2 RT 2: 1124268-1130942 bp 3 RT 3: 5353584-5358059 bp 4 RT 4: 5489816-5499354 bp Neighborhood of RT #1 [180318, 184684] RVT-GII group_II_RT_mat HNHc zf-IS66 DDE_Tnp_IS66 DUF4158 Neighborhood of RT #2 [1124268, 1131034] TetR_N TetR_C_28 COG4932 COG4932 COG4932 RVT-GII zf-IS66 DDE_Tnp_IS66 HNHc Neighborhood of RT #3 [5353584, 5358082] DEDD_Tnp_IS110 COG3547 RVT-GII PRK10420 DUF4870 Neighborhood of RT #4 [5489816, 5499398] zf-IS66 DDE_Tnp_IS66 COG4932 SpaA SpaA COG4932 SpaA SpaA RVT-GII LPXTG_anchor M28_like_PA Feature: gene Location: 180318-180503 bp Feature: gene Location: 180505-180801 bp Feature: gene Location: 180964-182139 bp Ori: AZR75136.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 180970-181168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 80970-1 81 1 68 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 181324-181552 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 81 324-1 81 552 bp Feature: domain Description: HNHc Note: nucleases Location: 181840-181978 bp Feature: domain Description: HNHc Note: nucleases Location: 1 81 840-1 81 978 bp Feature: gene Location: 182301-183704 bp Ori: AZR75137.1 Feature: domain Description: zf-IS66 Location: 182592-182730 bp Feature: domain Description: zf-IS66 Location: 1 82592-1 82730 bp Feature: domain Description: DDE_Tnp_IS66 Location: 182778-183585 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 82778-1 83585 bp Feature: gene Location: 183806-184684 bp Feature: domain Description: DUF4158 Location: 183851-184340 bp Feature: domain Description: DUF41 58 Location: 1 83851 -1 84340 bp Feature: gene Location: 1124268-1124804 bp Ori: AZR75972.1 Feature: domain Description: TetR_N Location: 1124298-1124430 bp Feature: domain Description: TetR_N Location: 1 1 24298-1 1 24430 bp Feature: domain Description: TetR_C_28 Location: 1124508-1124790 bp Feature: domain Description: TetR_C_28 Location: 1 1 24508-1 1 24790 bp Feature: gene Location: 1125129-1126757 bp Feature: domain Description: COG4932 Location: 1125315-1126149 bp Feature: domain Description: COG4932 Location: 1 1 2531 5-1 1 261 49 bp Feature: domain Description: COG4932 Location: 1126317-1126458 bp Feature: domain Description: COG4932 Location: 1 1 2631 7-1 1 26458 bp Feature: domain Description: COG4932 Location: 1126536-1126758 bp Feature: domain Description: COG4932 Location: 1 1 26536-1 1 26758 bp Feature: gene Location: 1127517-1128677 bp Ori: AZR75973.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1127811-1128525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 2781 1 -1 1 28525 bp Feature: gene Location: 1128713-1130116 bp Ori: AZR75974.1 Feature: domain Description: zf-IS66 Location: 1129004-1129142 bp Feature: domain Description: zf-IS66 Location: 1 1 29004-1 1 291 42 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1129190-1129997 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 1 291 90-1 1 29997 bp Feature: gene Location: 1130435-1131034 bp Ori: AZR75975.1 Feature: domain Description: HNHc Note: nucleases Location: 1130771-1130942 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 30771 -1 1 30942 bp Feature: gene Location: 5353584-5353886 bp Feature: gene Location: 5354302-5355447 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 5354317-5354791 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 535431 7-5354791 bp Feature: domain Description: COG3547 Location: 5355043-5355406 bp Feature: domain Description: COG3547 Location: 5355043-5355406 bp Feature: gene Location: 5355377-5355607 bp Ori: AZR80435.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5355425-5355545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5355425-5355545 bp Feature: gene Location: 5355807-5357468 bp Ori: AZR79977.1 Feature: domain Description: PRK10420 Location: 5355810-5357466 bp Feature: domain Description: PRK1 0420 Location: 535581 0-5357466 bp Feature: gene Location: 5357765-5358082 bp Ori: AZR79978.1 Feature: domain Description: DUF4870 Location: 5357783-5358059 bp Feature: domain Description: DUF4870 Location: 5357783-5358059 bp Feature: gene Location: 5489816-5491219 bp Ori: AZR80100.1 Feature: domain Description: zf-IS66 Location: 5490107-5490245 bp Feature: domain Description: zf-IS66 Location: 54901 07-5490245 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5490293-5491100 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5490293-5491 1 00 bp Feature: gene Location: 5491321-5494314 bp Feature: domain Description: COG4932 Location: 5491324-5492155 bp Feature: domain Description: COG4932 Location: 5491 324-54921 55 bp Feature: domain Description: SpaA Location: 5492197-5492398 bp Feature: domain Description: SpaA Location: 54921 97-5492398 bp Feature: domain Description: SpaA Location: 5492479-5492677 bp Feature: domain Description: SpaA Location: 5492479-5492677 bp Feature: domain Description: COG4932 Location: 5492698-5493853 bp Feature: domain Description: COG4932 Location: 5492698-5493853 bp Feature: domain Description: SpaA Location: 5493886-5494081 bp Feature: domain Description: SpaA Location: 5493886-5494081 bp Feature: domain Description: SpaA Location: 5494171-5494315 bp Feature: domain Description: SpaA Location: 54941 71 -549431 5 bp Feature: gene Location: 5495075-5496962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5495369-5496083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5495369-5496083 bp Feature: gene Location: 5497176-5497508 bp Ori: AZR80439.1 Feature: domain Description: LPXTG_anchor Location: 5497404-5497503 bp Feature: domain Description: LPXTG_anchor Location: 5497404-5497503 bp Feature: gene Location: 5497998-5499398 bp Ori: AZR80101.1 Feature: domain Description: M28_like_PA Location: 5498112-5499354 bp Feature: domain Description: M28_like_PA Location: 54981 1 2-5499354 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416), HNHc (smart00507), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DUF4158 (pfam13700), TetR_N (pfam00440), TetR_C_28 (pfam17937), COG4932 (Uncharacterized surface anchored protein ), DEDD_Tnp_IS110 (pfam01548)
COG3547 (Transposase ), PRK10420 (L-lactate permease; Provisional), DUF4870 (pfam09685), SpaA (pfam17802), LPXTG_anchor (TIGR01167), M28_like_PA (cd05661)

Seq: CP021437.1 Bacillus thuringiensis strain C15 plasmid pBMB240, complete sequence (240314 bp)
Overview 1 RT 1: 129328-136032 bp Neighborhood of RT #1 [129328, 136091] RVT-GII group_II_RT_mat HNHc zf-IS66 DDE_Tnp_IS66 RVT-GII RapH_N TPR_12 Phr_nterm Feature: gene Location: 129328-129513 bp Feature: gene Location: 129515-129811 bp Feature: gene Location: 129974-131149 bp Ori: AZR80566.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 129980-130178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 9980-130178 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 130334-130562 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 130334-130562 bp Feature: domain Description: HNHc Note: nucleases Location: 130850-130988 bp Feature: domain Description: HNHc Note: nucleases Location: 130850-130988 bp Feature: gene Location: 131311-132714 bp Ori: AZR80658.1 Feature: domain Description: zf-IS66 Location: 131602-131740 bp Feature: domain Description: zf-IS66 Location: 131602 -131740 bp Feature: domain Description: DDE_Tnp_IS66 Location: 131788-132595 bp Feature: domain Description: DDE_Tnp_IS66 Location: 131788-132 595 bp Feature: gene Location: 132853-133596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 133153-133597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 133153-133597 bp Feature: gene Location: 134858-135952 bp Ori: AZR80567.1 Feature: domain Description: RapH_N Location: 134879-135053 bp Feature: domain Description: RapH_N Location: 134879-135053 bp Feature: domain Description: TPR_12 Location: 135386-135569 bp Feature: domain Description: TPR_12 Location: 135386-135569 bp Feature: gene Location: 135954-136091 bp Ori: AZR80568.1 Feature: domain Description: Phr_nterm Location: 135957-136032 bp Feature: domain Description: Phr_nterm Location: 135957-136032 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416), HNHc (smart00507), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RapH_N (pfam18801), TPR_12 (pfam13424), Phr_nterm (TIGR04429)