myRT

myRT report for GCA_003991425.1_ASM399142v1

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Seq: CP034346.1 Paenibacillus sp. MBLB1234 chromosome, complete genome (6497679 bp)
Overview 1 RT 1: 470494-478198 bp 2 RT 2: 1781790-1793240 bp Neighborhood of RT #1 [470494, 478341] YesN YesN MFS_XylE_like RVT-GII GIIM DUF3221 DUF3221 GLY1 Neighborhood of RT #2 [1781790, 1793263] SLH SLH SLH Big_2 RVT-GII HNHc RVT-GII HNHc PRK09772 Feature: gene Location: 470494-471843 bp Ori: AZS13394.1 Feature: domain Description: YesN Location: 470500-471127 bp Feature: domain Description: YesN Location: 470500-471 1 27 bp Feature: domain Description: YesN Location: 471478-471838 bp Feature: domain Description: YesN Location: 471 478-471 838 bp Feature: gene Location: 472079-473455 bp Ori: AZS18085.1 Feature: domain Description: MFS_XylE_like Location: 472139-473405 bp Feature: domain Description: MFS_XylE_like Location: 4721 39-473405 bp Feature: gene Location: 473977-475377 bp Ori: AZS13395.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 474289-474916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 474289-47491 6 bp Feature: domain Description: GIIM Note: maturase Location: 474973-475201 bp Feature: domain Description: GIIM Note: maturase Location: 474973-475201 bp Feature: gene Location: 475770-476990 bp Ori: AZS13396.1 Feature: domain Description: DUF3221 Location: 476469-476697 bp Feature: domain Description: DUF3221 Location: 476469-476697 bp Feature: domain Description: DUF3221 Location: 476859-476952 bp Feature: domain Description: DUF3221 Location: 476859-476952 bp Feature: gene Location: 477241-478341 bp Ori: AZS13397.1 Feature: domain Description: GLY1 Location: 477328-478198 bp Feature: domain Description: GLY1 Location: 477328-4781 98 bp Feature: gene Location: 1781790-1783001 bp Ori: AZS14290.1 Feature: domain Description: SLH Location: 1781868-1781994 bp Feature: domain Description: SLH Location: 1 781 868-1 781 994 bp Feature: domain Description: SLH Location: 1782051-1782177 bp Feature: domain Description: SLH Location: 1 782051 -1 7821 77 bp Feature: domain Description: SLH Location: 1782300-1782393 bp Feature: domain Description: SLH Location: 1 782300-1 782393 bp Feature: gene Location: 1783016-1785316 bp Ori: AZS14291.1 Feature: domain Description: Big_2 Location: 1783760-1783871 bp Feature: domain Description: Big_2 Location: 1 783760-1 783871 bp Feature: gene Location: 1785994-1787799 bp Ori: AZS14292.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1786285-1786984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 786285-1 786984 bp Feature: domain Description: HNHc Note: nucleases Location: 1787539-1787674 bp Feature: domain Description: HNHc Note: nucleases Location: 1 787539-1 787674 bp Feature: gene Location: 1787800-1787886 bp Feature: gene Location: 1788790-1790583 bp Ori: AZS14293.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1789081-1789777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 789081 -1 789777 bp Feature: domain Description: HNHc Note: nucleases Location: 1790332-1790470 bp Feature: domain Description: HNHc Note: nucleases Location: 1 790332-1 790470 bp Feature: gene Location: 1790758-1791465 bp Feature: gene Location: 1792415-1793263 bp Ori: AZS14295.1 Feature: domain Description: PRK09772 Location: 1792418-1793240 bp Feature: domain Description: PRK09772 Location: 1 79241 8-1 793240 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesN (COG4753), MFS_XylE_like (cd17359), RVT-GII, GIIM (pfam08388), DUF3221 (pfam11518), GLY1 (COG2008), SLH (pfam00395), Big_2 (pfam02368), HNHc (smart00507), PRK09772 (transcriptional antiterminator BglG; Provisional)