myRT

myRT report for GCA_003994375.1_ASM399437v1

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Seq: CP029042.1 Streptomyces lydicus strain WYEC 108 chromosome, complete genome (9125666 bp)
Overview 1 RT 1: 8292618-8299859 bp 2 RT 2: 8717741-8722878 bp 3 RT 3: 8903829-8909238 bp 4 RT 4: 9110781-9114534 bp Neighborhood of RT #1 [8292618, 8299885] RicinB_lectin_2 RicinB_lectin_2 RVT-GII GIIM INT_ICEBs1_C_like ALDH_ACDHII-AcoD Neighborhood of RT #2 [8717741, 8722985] AdoMet_MTases RVT-GII Intron_maturas2 HNHc DUF4096 MFS_MosC_like Neighborhood of RT #3 [8903829, 8909303] PRK09183 Acetyltransf_1 RVT-GII GIIM LysR Neighborhood of RT #4 [9110781, 9114539] KTSC DUF4096 RVT-GII Intron_maturas2 HNHc DDE_Tnp_1_2 Feature: gene Location: 8292618-8293757 bp Ori: AZS75588.1 Feature: domain Description: RicinB_lectin_2 Location: 8292819-8292963 bp Feature: domain Description: RicinB_lectin_2 Location: 829281 9-8292963 bp Feature: domain Description: RicinB_lectin_2 Location: 8293005-8293182 bp Feature: domain Description: RicinB_lectin_2 Location: 8293005-82931 82 bp Feature: gene Location: 8294469-8295569 bp Feature: gene Location: 8296434-8297888 bp Ori: AZS75590.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8296758-8297454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8296758-8297454 bp Feature: domain Description: GIIM Note: maturase Location: 8297523-8297745 bp Feature: domain Description: GIIM Note: maturase Location: 8297523-8297745 bp Feature: gene Location: 8298028-8298342 bp Feature: domain Description: INT_ICEBs1_C_like Location: 8298043-8298334 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 8298043-8298334 bp Feature: gene Location: 8298362-8299885 bp Ori: AZS75591.1 Feature: domain Description: ALDH_ACDHII-AcoD Location: 8298422-8299859 bp Feature: domain Description: ALDH_ACDHII-AcoD Location: 8298422-8299859 bp Feature: gene Location: 8717741-8718538 bp Ori: AZS75919.1 Feature: domain Description: AdoMet_MTases Location: 8717897-8718185 bp Feature: domain Description: AdoMet_MTases Location: 871 7897-871 81 85 bp Feature: gene Location: 8718676-8718912 bp Feature: gene Location: 8719028-8720854 bp Ori: AZS75921.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8719295-8720090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 871 9295-8720090 bp Feature: domain Description: Intron_maturas2 Location: 8720192-8720411 bp Feature: domain Description: Intron_maturas2 Location: 87201 92-872041 1 bp Feature: domain Description: HNHc Note: nucleases Location: 8720615-8720780 bp Feature: domain Description: HNHc Note: nucleases Location: 872061 5-8720780 bp Feature: gene Location: 8721378-8721467 bp Ori: AZS75922.1 Feature: domain Description: DUF4096 Location: 8721381-8721456 bp Feature: domain Description: DUF4096 Location: 8721 381 -8721 456 bp Feature: gene Location: 8721744-8722985 bp Ori: AZS76907.1 Feature: domain Description: MFS_MosC_like Location: 8721771-8722878 bp Feature: domain Description: MFS_MosC_like Location: 8721 771 -8722878 bp Feature: gene Location: 8903829-8904077 bp Feature: domain Description: PRK09183 Location: 8903838-8904042 bp Feature: domain Description: PRK091 83 Location: 8903838-8904042 bp Feature: gene Location: 8904130-8904525 bp Ori: AZS76045.1 Feature: domain Description: Acetyltransf_1 Location: 8904214-8904493 bp Feature: domain Description: Acetyltransf_1 Location: 890421 4-8904493 bp Feature: gene Location: 8905263-8906717 bp Ori: AZS76046.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8905587-8906283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8905587-8906283 bp Feature: domain Description: GIIM Note: maturase Location: 8906352-8906574 bp Feature: domain Description: GIIM Note: maturase Location: 8906352-8906574 bp Feature: gene Location: 8907110-8907691 bp Feature: gene Location: 8908356-8909303 bp Ori: AZS76928.1 Feature: domain Description: LysR Location: 8908362-8909238 bp Feature: domain Description: LysR Location: 8908362-8909238 bp Feature: gene Location: 9110781-9110996 bp Ori: AZS76169.1 Feature: domain Description: KTSC Location: 9110805-9110973 bp Feature: domain Description: KTSC Location: 91 1 0805-91 1 0973 bp Feature: gene Location: 9111175-9111366 bp Feature: domain Description: DUF4096 Location: 9111193-9111367 bp Feature: domain Description: DUF4096 Location: 91 1 1 1 93-91 1 1 367 bp Feature: gene Location: 9111902-9113728 bp Ori: AZS76170.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9112169-9112964 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 1 21 69-91 1 2964 bp Feature: domain Description: Intron_maturas2 Location: 9113066-9113285 bp Feature: domain Description: Intron_maturas2 Location: 91 1 3066-91 1 3285 bp Feature: domain Description: HNHc Note: nucleases Location: 9113489-9113654 bp Feature: domain Description: HNHc Note: nucleases Location: 91 1 3489-91 1 3654 bp Feature: gene Location: 9113803-9113946 bp Feature: gene Location: 9113883-9114539 bp Ori: AZS76171.1 Feature: domain Description: DDE_Tnp_1_2 Location: 9114246-9114534 bp Feature: domain Description: DDE_Tnp_1 _2 Location: 91 1 4246-91 1 4534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RicinB_lectin_2 (pfam14200), RVT-GII, GIIM (pfam08388), INT_ICEBs1_C_like (cd01189), ALDH_ACDHII-AcoD (cd07116), AdoMet_MTases (cl17173), Intron_maturas2 (pfam01348), HNHc (smart00507), DUF4096 (pfam13340), MFS_MosC_like (cd17393)
PRK09183 (transposase/IS protein; Provisional), Acetyltransf_1 (pfam00583), LysR (COG0583), KTSC (pfam13619), DDE_Tnp_1_2 (pfam13586)